Pairwise Alignments

Query, 717 a.a., sensory box histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 681 a.a., PAS domain-containing sensor histidine kinase from Magnetospirillum magneticum AMB-1

 Score =  125 bits (314), Expect = 7e-33
 Identities = 100/366 (27%), Positives = 177/366 (48%), Gaps = 17/366 (4%)

Query: 353 LIANEKRFRLIIEASPSALFMVDKTGVITLVNTQGERLFGYTREELLGRSINMLLPETLR 412
           L A+E+R+R +IE     +  +     +  VN    R  G    + +GRS    + E  +
Sbjct: 319 LRASEERYRGLIETQNDLVVRLTPDDRLVFVNEAFARSHGLDAAQAVGRSWRTFVHEEDQ 378

Query: 413 EIHQQHLSHYLVHPIAK-----NMSMRDDLLGCCKDGTPLAVEVGLTPVHFSNGIYILTT 467
               Q L+  L  P  +      M+M   L     +G  +    G       N + I   
Sbjct: 379 PATAQALATALSPPAFRATVECRMTMTCGLRWVSWEGAAIRDMSG-------NIVEIQAA 431

Query: 468 INNISERKRIEAQRIEHMAELERINQELDRFAYIASHDLKSPLRGIEQLTTWLSEDLVDN 527
             +I+E      ++ E +  L++ N+EL++FAY+ASHDL+ PLR I      L       
Sbjct: 432 GRDITEWVEHRDRQAELLRNLDKSNRELEQFAYVASHDLREPLRMISSYLGLLGRRYTAL 491

Query: 528 TNENVQKYLGLIQNRIQRMVRLLDGLLTFSRIGRVDNEMVEV---DSRQLVEDMFALVAP 584
            +E+ ++++   ++  +RM +++  LL FSR+GR+ + +  V   ++  +     AL   
Sbjct: 492 LDEDGRQFMEFARDGAKRMDQMVLDLLEFSRVGRLRDGLGTVSLGEAASIAILNLALPIK 551

Query: 585 PQGFELVLEGDFPHFKTVKTLLELVVRNLISNAIKHHDRGFGVLKVLCETKNTYYW-FSV 643
             G  + +  D P     +  +  +++NLI NA+K+   G  +   +   +N   W  +V
Sbjct: 552 ESGGTVTVAPDLPEITGARGEMIRLMQNLIGNAVKYRQPGRPLTVTVSAERNHDGWTLTV 611

Query: 644 VDDGPGISSEFQLKVFEMFQTLRPRDEVEGSGLGLSLVKKTVDSLGGKIQLESV-GRGCC 702
            D+G GI  +   ++F++FQ L  R + EG+G+GL++ +K V+  GG+I +ESV G G  
Sbjct: 612 ADNGIGIPPDGFERIFDIFQRLHSRADYEGTGIGLAVCRKIVEHHGGRIWVESVPGEGSR 671

Query: 703 FRFSWP 708
           FRF+ P
Sbjct: 672 FRFTLP 677