Pairwise Alignments

Query, 717 a.a., sensory box histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 572 a.a., two-component sensor histidine kinase from Magnetospirillum magneticum AMB-1

 Score =  108 bits (269), Expect = 1e-27
 Identities = 74/226 (32%), Positives = 117/226 (51%), Gaps = 9/226 (3%)

Query: 488 LERINQELDRFAYIASHDLKSPLRGIEQLTTWLSEDLVDNTNENVQKYLGLIQNRIQRMV 547
           LER N +L+RFAY+ASHDLK+PLR I      L     D  +E   +Y+  +    +RM 
Sbjct: 342 LERSNADLERFAYVASHDLKTPLRVITGYAQMLDRRYRDKLDEEANEYIAFLTAGTKRMY 401

Query: 548 RLLDGLLTFSRIGRVDNEMVEVDSRQ----LVEDMFALVAPPQGFELVLEGDFPHFKTVK 603
           RL+  LL +SRI      +  V + +     + ++ A++   +    V  G  P  +  +
Sbjct: 402 RLITDLLHYSRINSQAKPLQPVSAGRATDIAISNLKAVI--EESGASVSVGPLPTIQADE 459

Query: 604 TLLELVVRNLISNAIK--HHDRGFGVLKVLCETKNTYYWFSVVDDGPGISSEFQLKVFEM 661
           + L  + +NL+ NAIK  H +R   +         T + F+V D+G GI  E   ++F +
Sbjct: 460 SQLSSLFQNLLGNAIKYRHPERKPEIRIEAVRLSGTLWRFAVKDNGIGIEPEHFERIFVI 519

Query: 662 FQTLRPRDEVEGSGLGLSLVKKTVDSLGGKIQLES-VGRGCCFRFS 706
           FQ L      +G+G+GL+L ++ V  LGG+I +ES  G G  F F+
Sbjct: 520 FQRLHSDSAYDGTGIGLALCQRIVTRLGGRIWVESRPGEGSTFFFT 565