Pairwise Alignments

Query, 717 a.a., sensory box histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 458 a.a., PAS domain-containing sensor histidine kinase from Magnetospirillum magneticum AMB-1

 Score =  117 bits (293), Expect = 1e-30
 Identities = 77/243 (31%), Positives = 125/243 (51%), Gaps = 8/243 (3%)

Query: 473 ERKRIEAQRIEHMAE-LERINQELDRFAYIASHDLKSPLRGIEQLTTWLSEDLVDNTNEN 531
           E  R++A+++    E L   N EL+RFA++ASHDL+ PLR +      +  D  +  ++ 
Sbjct: 207 ESGRLQAEKLAKAVETLTEANAELERFAFVASHDLQEPLRTVACFAQLVERDYGEGLDDR 266

Query: 532 VQKYLGLIQNRIQRMVRLLDGLLTFSRIGRVDNEMVEVDSR---QLVEDMFALVAPPQGF 588
            ++YL L+     RM  +++ LL +SR  R +  +  V +    Q   +         G 
Sbjct: 267 GRQYLELVTGGAIRMHEMVNDLLAYSRTSRSEGRIERVSAATACQSALNNLREAIDSSGA 326

Query: 589 ELVLEGDFPHFKTVKTLLELVVRNLISNAIKHHDRGF-GVLKVLCETKNTYYWFSVVDDG 647
           E+ +    P       +L  V +NL+ NA+K+   G    ++V  E    Y+ FSV D+G
Sbjct: 327 EITV-APLPEVDADPVMLIQVFQNLVGNAVKYRKEGLVPHIQVSAEQAGRYWQFSVADNG 385

Query: 648 PGISSEFQLKVFEMFQTLRPRDEVEGSGLGLSLVKKTVDSLGGKIQLESV-GRGCCFRFS 706
            G   + Q  VFE+F+ L P     G+G+GL++ K+ V+ LGG I +ES  G G  FRF+
Sbjct: 386 IGFDPKEQ-DVFELFRRLHPHSSYAGTGVGLAICKRIVNRLGGHIWVESTPGAGSVFRFT 444

Query: 707 WPI 709
            P+
Sbjct: 445 LPL 447