Pairwise Alignments

Query, 717 a.a., sensory box histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 497 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  149 bits (376), Expect = 3e-40
 Identities = 99/255 (38%), Positives = 147/255 (57%), Gaps = 20/255 (7%)

Query: 466 TTINNISERKRIEAQRIEHMAELERINQELDRFAYIASHDLKSPLRGIEQLTTWLSEDLV 525
           +TI +I+ERKR+E +    + EL R N+EL++FAY+ASHDL+ PLR +    + L E+L+
Sbjct: 241 STIQDITERKRLENELDGLIRELWRSNEELEQFAYVASHDLRQPLRVVGSYVSLLEEELL 300

Query: 526 DNTNENVQKYLGLIQNRIQRMVRLLDGLLTFSRIGRVDN-------EMVE---VDSRQLV 575
           D    +  +Y+G +++ ++RM RL+  LL +SR+GRV         E VE    D +  +
Sbjct: 301 DTLGGDSLEYMGFVRDGVRRMDRLITDLLAYSRVGRVIGDAPFAAAEAVESALSDLQIEI 360

Query: 576 EDMFALVAPPQGFELVLEGDFPHFKTVKTLLELVVRNLISNAIKHHDRGFGV-LKVLCET 634
           ED  A ++       VL GD       +  +E +  NLI NA+K+H  G    + V CE 
Sbjct: 361 EDCDATLSVAAALP-VLYGD-------RGEMERLFVNLIGNALKYHRPGQPPHVSVECED 412

Query: 635 KNTYYWFSVVDDGPGISSEFQLKVFEMFQTLRPRDEVEGSGLGLSLVKKTVDSLGGKIQL 694
           +   + F V D+G GI  E   +VF +FQ L  RDE EG+G+GL++ KK VD  GG I++
Sbjct: 413 QGGEWLFRVRDNGIGIPPEHAERVFGIFQRLHARDEYEGTGVGLAICKKIVDRHGGAIRV 472

Query: 695 ES-VGRGCCFRFSWP 708
           ES  G G    F+WP
Sbjct: 473 ESQSGPGTVLAFTWP 487