Pairwise Alignments

Query, 717 a.a., sensory box histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 823 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  130 bits (328), Expect = 2e-34
 Identities = 88/253 (34%), Positives = 138/253 (54%), Gaps = 6/253 (2%)

Query: 462 IYILTTINNISERKRIEAQRIEHMAELERINQELDRFAYIASHDLKSPLRGIEQLTTWLS 521
           I ++ TI +I+ ++R E    +   ELER N EL++FAY+ASHDL+ PLR +      L+
Sbjct: 566 IRMVGTIKDITNQRRAEQALRDKAEELERSNTELEQFAYVASHDLREPLRMVSSYVDLLA 625

Query: 522 EDLVDNTNENVQKYLGLIQNRIQRMVRLLDGLLTFSRIGRVDNEMVEVDSRQLVEDMFAL 581
               D  +++ ++++   ++   RM RL+  LL +SRIGR+   M+ V    +VE     
Sbjct: 626 RRYGDKLDDDAREFIAFAKDGATRMDRLILELLEYSRIGRITRPMLPVALGPVVERALRA 685

Query: 582 VAP---PQGFELVLEGD-FPHFKTVKTLLELVVRNLISNAIKHHD-RGFGVLKVLCETKN 636
           +AP     G E+       P        L  + +NLI NAIK+ D     V+ +  E   
Sbjct: 686 LAPKIEESGAEIATPPSVLPTVLGDAEELMRLFQNLIGNAIKYRDPERKPVITLEAENTG 745

Query: 637 TYYWFSVVDDGPGISSEFQLKVFEMFQTLRPRDEVEGSGLGLSLVKKTVDSLGGKIQLES 696
             +  +VVD+G GI  ++  +VF +FQ L  R E EG+G+GL++ KK V+  GG+I +ES
Sbjct: 746 KEWVLTVVDNGIGIDPKYYERVFLIFQRLHRRGEFEGTGIGLAVCKKIVEHHGGRIWVES 805

Query: 697 V-GRGCCFRFSWP 708
           V G+G  F  + P
Sbjct: 806 VPGQGSRFSVTLP 818