Pairwise Alignments

Query, 717 a.a., sensory box histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 798 a.a., CHASE3 domain-containing protein from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  110 bits (275), Expect = 3e-28
 Identities = 107/419 (25%), Positives = 183/419 (43%), Gaps = 37/419 (8%)

Query: 310 ISRAEQTRSVWLQVIGCAFILALFYAVISMA----RNRYQESMLTAELIANEKRFRLIIE 365
           +S   Q R+   +++  A  LAL       A    R       L   L A   R    ++
Sbjct: 150 LSDRAQGRTARTEILVVALFLALVLTAAGAAFLVWRYLATRGALLERLEAAAARHAATLD 209

Query: 366 ASPSALFMVDKTGVITLVNTQGERLFGYTREELLGRSINMLLPETLREIHQQHLSHYLVH 425
           ++  A+  ++ +G I  +N   ER+FG+  E+L+ R + +L+     ++       +L  
Sbjct: 210 SAFDAIITLNPSGSIETLNPAAERMFGWRAEDLVRRDVGVLI-----DLANNGEGSFLDR 264

Query: 426 PIAKNMSMRDDLL----GCCKDGTPLAVEVGLTPVHFSNGIYILTTINNISERKRIEAQR 481
             A   ++ D LL    G  +DG   A +V L  +    G +++  + +I+ER+R+    
Sbjct: 265 LGASQGALADGLLRELNGKRRDGQTFAADVALGAMDLPTGRHVVAVVRDITERRRV---- 320

Query: 482 IEHMAELERINQELDRFAYIASHDLKSPLRGIEQLTTWLSEDLVDNTNENVQKYLGLIQN 541
               AE++      D F    SH+L++PL  I      L+        +   + +G+  +
Sbjct: 321 ----AEMK------DAFVSTVSHELRTPLTSIAGSLGLLAGGAGGELPDKAARLIGIAHS 370

Query: 542 RIQRMVRLLDGLLTFSRI--GRVDNEMVEVDSRQLVE---DMFALVAPPQGFELVL-EGD 595
             QR+VRL++ +L   ++  G++   M  +D R++     D     A   G  L L EGD
Sbjct: 371 NSQRLVRLINDILDVEKLESGKLILAMSPLDLREIAARSIDGVRGYADQLGVSLSLGEGD 430

Query: 596 FPHFKTVKTLLELVVRNLISNAIKHHDRGFGVLKVLCETKNTYYWFSVVDDGPGISSEFQ 655
               +     L  VV NL+SNA K    G G + V    +      SV D GPGI   F+
Sbjct: 431 PAPVRGDADRLIQVVTNLLSNAAKFSPAG-GEVAVTVNPEARIARLSVTDHGPGIPEAFR 489

Query: 656 LKVFEMFQTLRPRD--EVEGSGLGLSLVKKTVDSLGGKIQLESV-GRGCCFRFSWPIHI 711
            ++F  F      D     G+GLGL++ ++  +  GG++  ES  G G  F    P+ +
Sbjct: 490 SRIFGKFAQADSTDTRAKGGTGLGLAIAREIAERHGGRLWFESAEGDGATFHLDLPLDL 548