Pairwise Alignments

Query, 318 a.a., immunogenic-related protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 337 a.a., Putative aliphatic sulfonates-binding protein from Pseudomonas sp. DMC3

 Score = 51.2 bits (121), Expect = 3e-11
 Identities = 47/128 (36%), Positives = 69/128 (53%), Gaps = 11/128 (8%)

Query: 91  VAAAYQGDADA--GFKKPLDKVRVLAAA---YPNYIQIVASKESGIKTLADLKGKRISVG 145
           V  AY GD  A  G    LD  R+L+A       Y+ +V    SGIKTL DLKGKR+++ 
Sbjct: 93  VDLAYLGDLAAIIGKSNGLD-TRLLSATARGVKQYLGVVPG--SGIKTLQDLKGKRVAI- 148

Query: 146 APKSGTELNARAIFKAAGLSYEDMGKVEFLPYAESVELIKNRQLDATLQSSGLGMAAIRD 205
              + T+L+  A   + GLS +D+ KV  L +  +V  +  +Q+DA+  SS L     + 
Sbjct: 149 FRGTATQLSFDAALASQGLSEKDL-KVINLDFNAAVSALAAKQIDASWGSSALSALQAKG 207

Query: 206 LATTMPIN 213
           LA  +P+N
Sbjct: 208 LA-ELPLN 214