Pairwise Alignments

Query, 318 a.a., immunogenic-related protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 325 a.a., TRAP transporter solute receptor, TAXI family precursor from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  120 bits (302), Expect = 3e-32
 Identities = 88/314 (28%), Positives = 136/314 (43%), Gaps = 7/314 (2%)

Query: 8   IAVSAALTLSLSAATMAAAPAFINILTGGTSGVYYPIGVALSQLYGT--GIEGAKTSVQA 65
           +A +AAL   ++ A   A   F+ I TGG +GVYY  G A+ +L        G + SV++
Sbjct: 11  LATAAALMTPMAPAQ--AQQKFMTIGTGGVTGVYYAAGGAICRLVNKDRARHGIRCSVES 68

Query: 66  TKASVENLNLLQAGRGELALALGDSVAAAYQGDADAGFKKPLDKVRVLAAAYPNYIQIVA 125
           T  SV N+N ++AG  +L     D    A +G            +R + A +P    +VA
Sbjct: 69  TGGSVFNVNTIKAGELDLGFTQSDVQFNALKGVGQFKDAGAYGDLRAVFAVHPEPFTVVA 128

Query: 126 SKESGIKTLADLKGKRISVGAPKSGTELNARAIFKAAGLSYEDMGKVEFLPYAESVELIK 185
            KE+ I    D KGKR +VG P SGT  +   +    G    D      L   E    + 
Sbjct: 129 RKEANITKFEDFKGKRFNVGNPGSGTRSSMEELLAGMGWKLSDFSLASELKADEHGPALC 188

Query: 186 NRQLDATLQSSGLGMAAIRDLATTMPINFVEVPEDVILKI--NNPAYQHGVIPASTYEGQ 243
           + ++D    + G   A I+D  T+     V +    + K+    P Y    +P   Y   
Sbjct: 189 DGKIDGFYYAVGHPSANIQDPTTSCGAKLVSITGPAVDKLVAEKPYYAKVTLPGGLYPNN 248

Query: 244 TADVSTVAIQNLFVTQTGVSDDLAYQMTKLMFEHLDRLGNAHSAAKAIQLDKATKN-LPA 302
                T  +    V  +  S +  YQ+ K +F++ D     H A   +  +   K+ L A
Sbjct: 249 PQPTQTYGVSATVVASSKTSAETVYQVVKAVFDNFDEFKKLHPALANLTPEGMVKDGLSA 308

Query: 303 PLHPGAERYFKEVG 316
           PLH GA +++KE G
Sbjct: 309 PLHEGALKFYKEKG 322