Pairwise Alignments

Query, 318 a.a., immunogenic-related protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 358 a.a., hypothetical protein from Magnetospirillum magneticum AMB-1

 Score =  116 bits (290), Expect = 9e-31
 Identities = 90/329 (27%), Positives = 147/329 (44%), Gaps = 19/329 (5%)

Query: 6   RFIAVSAALTLSLSAATMAAAPAFINILTGGTSGVYYPIGVALSQLYGT----------- 54
           R I ++A L L  +   +A    F  I TG T    +  G  ++                
Sbjct: 28  RSIVIAALLLLLTTGLGLAQDIRFFQIGTGPTGETRFAFGGLIANAISNPPGSRECDKGG 87

Query: 55  --GIEGAKTSVQATKASVENLNLLQAGRGELALALGDSVAAAYQGDADAGFKKPLDKVRV 112
             G+ G     ++T  ++ N++ + A R + AL   D    AY G      K  +  +R 
Sbjct: 88  SCGVPGMVAVAKSTGGAIANIDAIAAKRLDAALVQSDIAYWAYHGTGIYKGKGAVQNLRA 147

Query: 113 LAAAYPNYIQIVASKESGIKTLADLKGKRISVGAPKSGTELNARAIFKAAGLSYEDMGKV 172
           +A  YP  + +VA K++ I ++ DLKGKR+S+G   SG  ++ R +  A G++ E   K 
Sbjct: 148 IAMLYPESLHLVARKDAKIHSVKDLKGKRVSLGDKDSGELVHGRLLLAAFGMT-ESQIKQ 206

Query: 173 EFLPYAESVELIKNRQLDATLQSSGLGMAAIRDLATTMPINFVEV--PEDVILKINNPAY 230
            FL    + + +   QLDA L   GL +  + +LA    I  + +  PE   ++   P +
Sbjct: 207 SFLKPGPAADAVAAGQLDAMLVVDGLPVPIVSELAQRSDIVLIPLAGPEVDKMRATYPFF 266

Query: 231 QHGVIPASTYEGQTADVSTVAIQNLFVTQTGVSDDLAYQMTKLMFEHLDR--LGNAHSAA 288
               IPA TY G  A+V T+ +  + VT     +DL Y +T+ ++    +  L  +H   
Sbjct: 267 AASSIPADTYRGSDAEVKTLDVGVVLVTGAEQPNDLIYGVTRALWHPSTQKLLTESHPRG 326

Query: 289 KAIQLDKA-TKNLPAPLHPGAERYFKEVG 316
           K + L  A    L   LH GA  Y+ + G
Sbjct: 327 KLVSLSAAGLDKLGIQLHGGASAYYFDAG 355