Pairwise Alignments

Query, 267 a.a., oxidoreductase, short chain dehydrogenase/reductase family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 271 a.a., short-chain dehydrogenase from Pseudomonas simiae WCS417

 Score =  107 bits (268), Expect = 2e-28
 Identities = 87/273 (31%), Positives = 127/273 (46%), Gaps = 24/273 (8%)

Query: 9   VIITGASEGIGRALAIAMARIGCQLVLSARNETRLASLALEVANYGPTPFVFAADVSSAS 68
           ++ITGA  G+GR +A+  AR G QL LS  +E  L      V   G   F+   DV   S
Sbjct: 5   MMITGAGSGLGREIALRWAREGWQLALSDVSEPGLQETLKRVRESGGDGFIQRCDVRDYS 64

Query: 69  QCEDLIHATIAHYGRIDILVNNAGMTMWSRFDELTQLSVLED---IMRVNYLGPAYLTHA 125
           Q      A     G ID++VNNAG+     F EL+    LED    + +N +G      A
Sbjct: 65  QLTAFAQACEVKLGGIDVIVNNAGVASGGFFAELS----LEDWDWQIAINLMGVVKGCKA 120

Query: 126 ALPYLKSSQGQVVIVASVAGLTGVPTRSGYAASKHAVIGFFDSLRIELADDNVAVTVICP 185
            LP L+ S+G+++ +AS+A L   P  S Y  +K  V+   +SL +EL    V V V+CP
Sbjct: 121 FLPLLEKSKGRIINIASMAALMQGPAMSNYNVAKAGVVALSESLLVELKQQEVGVHVVCP 180

Query: 186 DFVVSQIHKRALDGAGKPLGKSPMQEAKIL-----SAEQCANMMLPVIATRGRLLITSLR 240
            F  + +    LD    P      Q  K+L     SA   A+ +   +A    +++   +
Sbjct: 181 SFFQTNL----LDSFRGPTPAMKAQVGKLLESSPISAADIADYIYQRVAEGEFMILPHEQ 236

Query: 241 GRLGRWLKLIAPGLI--------DKIARKAIAS 265
           GR+   LK   P L+        DK+  KA A+
Sbjct: 237 GRMAWALKQKNPQLLYDEMTTMADKMRAKAQAA 269