Pairwise Alignments

Query, 267 a.a., oxidoreductase, short chain dehydrogenase/reductase family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 296 a.a., short-chain dehydrogenase from Pseudomonas simiae WCS417

 Score =  112 bits (281), Expect = 7e-30
 Identities = 74/188 (39%), Positives = 102/188 (54%), Gaps = 5/188 (2%)

Query: 1   MDGLTGKVVIITGASEGIGRALAIAMARIGCQLVLSARNETRLASLALEVANYGPTPFVF 60
           M    G+V  ITGA+ G+GRALA+A+AR GC L L+ +N   L      +      P + 
Sbjct: 1   MKSFNGRVAAITGAASGMGRALAMALAREGCHLALADKNSQGLEQTLALIKASTLAPVLI 60

Query: 61  AA---DVSSASQCEDLIHATIAHYGRIDILVNNAGMTMWSRFDELTQLSVLEDIMRVNYL 117
                DVS     ED     +A +GR++++ NNAG+ + S   E    + LE I+ +N+ 
Sbjct: 61  TTQVLDVSDRRAMEDWAARCVAEHGRVNLVFNNAGVALSSTV-EGVDYADLEWIVGINFW 119

Query: 118 GPAYLTHAALPYLKSS-QGQVVIVASVAGLTGVPTRSGYAASKHAVIGFFDSLRIELADD 176
           G  + T A LPYLK+S +G VV  +SV GL   P  SGY A+K AV GF +SLR EL   
Sbjct: 120 GVVHGTKAFLPYLKASGEGHVVNTSSVFGLFAQPGMSGYNATKFAVRGFTESLRQELDMQ 179

Query: 177 NVAVTVIC 184
              V+  C
Sbjct: 180 RCGVSATC 187