Pairwise Alignments

Query, 267 a.a., oxidoreductase, short chain dehydrogenase/reductase family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 256 a.a., 3-hydroxybutyrate dehydrogenase (EC 1.1.1.30) from Variovorax sp. SCN45

 Score =  109 bits (272), Expect = 7e-29
 Identities = 65/234 (27%), Positives = 118/234 (50%), Gaps = 4/234 (1%)

Query: 4   LTGKVVIITGASEGIGRALAIAMARIGCQLVLSARNETRLASLALEVANYGPTPFVFAAD 63
           L GK  ++TG++ GIG A+A ++A+ G  +VL+   +       +E    G       AD
Sbjct: 2   LKGKTALVTGSTSGIGLAIAKSLAQQGANIVLNGFGDAEAPKSQIEAL--GVRAEYHGAD 59

Query: 64  VSSASQCEDLIHATIAHYGRIDILVNNAGMTMWSRFDELTQLSVLEDIMRVNYLGPAYLT 123
           +S   Q ED++    + +GR+DILVNNAG+   ++ ++       + I+ +N     + T
Sbjct: 60  MSKPEQIEDMMKFAASKFGRVDILVNNAGIQHVAKVEDFPA-ERWDAIIAINLTSAFHTT 118

Query: 124 HAALPYLKSSQ-GQVVIVASVAGLTGVPTRSGYAASKHAVIGFFDSLRIELADDNVAVTV 182
             A+P ++ +  G+V+ +AS  GL     +S Y A+KH ++G   S+ +E A   V V  
Sbjct: 119 RLAIPAMREANWGRVINIASAHGLVASAQKSAYVAAKHGIVGLTKSVALETATTGVTVNA 178

Query: 183 ICPDFVVSQIHKRALDGAGKPLGKSPMQEAKILSAEQCANMMLPVIATRGRLLI 236
           ICP +V++ + ++ +D      G +  Q    L  E+  ++    +   G L +
Sbjct: 179 ICPGWVLTALVQKQIDDRAAREGITAAQAQNELLGEKQPSLQFTTVEQLGGLAV 232