Pairwise Alignments

Query, 856 a.a., sensory box protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 631 a.a., Sensory box protein from Pseudomonas putida KT2440

 Score =  219 bits (559), Expect = 3e-61
 Identities = 163/555 (29%), Positives = 275/555 (49%), Gaps = 48/555 (8%)

Query: 312 ESIAEAVILTDIEAKVIYMNPKAETLLEVASSNAVG-----------------ESLASLL 354
           +S  E V++TD +  ++++N     +        +G                 E  A+L 
Sbjct: 92  DSTLEGVLVTDRQGLIVHVNRAFMRITGYQQDEVIGQRPSKFKSGHHGLAFYQEVFATLA 151

Query: 355 KAGEQLNQAVFHCIRLGETMPQVAKIKLLTTMPRIIERSISNVLNHEKEIVGTVVVLRDI 414
           + GE   + +++  + GE  PQ               ++I  + + E E+   V V  DI
Sbjct: 152 EKGEWSGE-IWNRRKSGEIYPQW--------------QTICAIRDDEGELSHYVAVFSDI 196

Query: 415 TQEELLKHQLQKRANFDGITGLLNRQAFEEQLPEFASQA----RSLAVCYLDLEQFKLIN 470
           +  +  + +L   A+ D +TGL NR  F ++L +  + A    R  A+  LDL+ F+ IN
Sbjct: 197 SAIKHSEQELAYLAHHDPLTGLPNRLLFTDRLEQALAAAQANKRGCALLLLDLDHFQSIN 256

Query: 471 DSCGHTAGDRMLAMVARAIQSCLGPQELLARIGGDEFGLVICDRTALAVAQLLKQIIAQV 530
           D  GHT GD++L +V   +   LG    LAR+GGDEFG+++ +   +  A  L Q I + 
Sbjct: 257 DGLGHTIGDQLLKLVGERLGEVLGNGVTLARLGGDEFGVLVENCQQVGQAGKLAQCIIER 316

Query: 531 SLQVLHDKNCNYKVGLSIGVAFGRAPYINAQELLKDADIACIAAKAKGTNQIHIYDDKDK 590
             +          +  S+G++   +  + A++LL++AD A   AK+ G     +Y +   
Sbjct: 317 MREPFQFDGNRLFISASVGISLYPSDALGAEQLLRNADSALYKAKSNGRACYALYTE--- 373

Query: 591 ELT-YQRNAPKWAVRIAQAIEENELLLYYQPIRGLGASSKRQRMEVLLRIQEPCGRILAP 649
           ELT + ++  + A  + +A+E++EL +Y+QP+  L AS ++  +E L+R Q P   ++ P
Sbjct: 374 ELTAHAQHRVETAAELRRALEQDELRVYFQPVHDL-ASGRQVGVETLVRWQHPRRGLVPP 432

Query: 650 AQFIAAAERFKLMPEIDKEVIRKA----FLWLSLNSQLWQDHCISINLSGNSLGAEGMVE 705
            +FI  AER  L+ EID  V+R+A      W +   QL     + +N+S    G   +  
Sbjct: 433 GEFIPIAERTGLIAEIDTWVLRQACRQMVQWQAQGRQL---AFVGVNISSRLFGQHELYR 489

Query: 706 YIAKQQQIFDIPSQCVCFEITETTAIQNRHRGMEMLRQLRKLGFSFALDDFGSGFASYGY 765
            +A+      +    +  E+TE+  +++    +E L +LR+LG + A+DDFG+G++S   
Sbjct: 490 QVAEVLHDTGLAPALLELEVTESAVMEDPEVALEQLHRLRELGVTLAIDDFGTGYSSLLR 549

Query: 766 LRELPVDYVKIDGCFVKNLAVNAKDYAIVKSIQDVCRVMGIETVAEFVENQEIIDRLQTI 825
           L+ LPV  +KID  FV  L V+  D AIV+ I  + R MG++  AE +E  E    L   
Sbjct: 550 LKRLPVQKLKIDQGFVAGLPVDEDDIAIVRVIIALARSMGMQVHAEGIEQAEQASFLLQE 609

Query: 826 GINYAQGYAIGRPQP 840
                QGY  GRP P
Sbjct: 610 ECQLGQGYWFGRPVP 624