Pairwise Alignments

Query, 161 a.a., regulator of sigma D (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 162 a.a., Regulator of sigma D from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 95.9 bits (237), Expect = 3e-25
 Identities = 54/160 (33%), Positives = 89/160 (55%), Gaps = 4/160 (2%)

Query: 1   MLRELEKAEQKWGGSNKLIDQWLENRRKLLVHYCQIAGLPPYTNAEKSLPSFEHVKSFCD 60
           ML +LE   ++ GGSNKL+D+WL+ R+ LLV Y  + G+ P   +   L + + +  FC 
Sbjct: 1   MLNQLENLTERVGGSNKLVDRWLDVRKHLLVAYYNLVGIKPGKESYMRL-NEKALDDFCQ 59

Query: 61  LLVDYVSEGHFEVYDQVINACEKFGAPCKAAIQQVLPKITPTTNAALDFNDKYAETQ-DD 119
            LVDY+S GHF +Y+++++  E  G    AA  ++ P +   T   +D+ D   ET  D 
Sbjct: 60  SLVDYLSAGHFSIYERILHKLEGNGQLLHAA--KIWPLLEDNTQRIMDYYDTSLETAIDH 117

Query: 120 QVLYQLDKDLSELAHTMETRFELEDKLLEVLHSKYSEHAQ 159
               +  + LS++   +E RF LEDKL+ ++     + A+
Sbjct: 118 DNCLEFQQALSDIGEALEARFVLEDKLIMLVFDAMHDGAR 157