Pairwise Alignments

Query, 295 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 294 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score =  217 bits (552), Expect = 3e-61
 Identities = 116/294 (39%), Positives = 169/294 (57%), Gaps = 1/294 (0%)

Query: 1   MEHFSALPIFVTVVECGSFSLAGQKLGLSKSAISKRISQLEQHLGIQLLQRTTRSLSLTD 60
           M  +  + IF  V+E GSF+ A  +LG+SK ++S+R+ QLE+ LG++LL R+TR L  T 
Sbjct: 1   MNPYEDMRIFAQVMEAGSFTAAADRLGMSKQSVSRRLMQLEERLGVRLLNRSTRRLDATP 60

Query: 61  AGARYFEYIRPAVQLTQEGLDAISELQQTPRGNLRISVPMVFGRLYIAPLIAEFLKRYPD 120
            G  Y++     +   Q+    IS   Q  RG LR+S P+ F   ++  L+ EFL+ +P 
Sbjct: 61  LGQHYYQSALRLLGEVQQVEHDISGQAQVLRGTLRLSAPLSFAMAHLGCLLTEFLQLHPQ 120

Query: 121 IQLQMQMDDKITDLIAGGFDLAIRIGELPDSSLIARKIAPCLSVICASPAYLTQHGLPMT 180
           + +++ + D+  DLI  G+DLA+RIG L DSSLIAR+IA    V CASPAYL   G+P  
Sbjct: 121 VDVEVDLSDRAVDLIGEGYDLALRIGALEDSSLIARRIASVERVYCASPAYLQARGVPGK 180

Query: 181 PCELTQHNCLFYSYFQDGVEWSFHSPDGMQRVQPKGNYQVNNSDAINQACLDGLGIANLP 240
           P EL  H+CL Y + +  V+W FH     Q +Q  G  + NN + +  A + G+G+  LP
Sbjct: 181 PDELAAHDCLPYGHSRQ-VQWQFHKGGKTQAIQVTGRMRANNGELLRGAAIAGMGVTYLP 239

Query: 241 RFIVEPDLQTGHLQALLTDYPLPEHGIYAVYPQRKYQPTKVTVLIEFLMAKLGQ 294
            FIV   L  G L  +L ++  P   + AVYPQ +     V   + FL A+L Q
Sbjct: 240 TFIVGQALAEGQLVTVLDEWRPPALQLSAVYPQHRQVARPVQGFVSFLRARLAQ 293