Pairwise Alignments

Query, 295 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 316 a.a., LysR family transcriptional regulator from Paraburkholderia sabiae LMG 24235

 Score =  201 bits (511), Expect = 2e-56
 Identities = 110/286 (38%), Positives = 162/286 (56%), Gaps = 4/286 (1%)

Query: 9   IFVTVVECGSFSLAGQKLGLSKSAISKRISQLEQHLGIQLLQRTTRSLSLTDAGARYFEY 68
           +FV      + S AG++ GLS +  S RI+ LE+ LG +LL RTTR +SLT  G  +   
Sbjct: 22  LFVRAALLANVSAAGREFGLSPAVASARIANLEKLLGARLLHRTTRRVSLTQEGEVFMAR 81

Query: 69  IRPAVQLTQEGLDAISELQQTPRGNLRISVPMVFGRLYIAPLIAEFLKRYPDIQLQMQMD 128
               +        ++   Q  P+G LR+S+P  FGR +++P+IA FL+RYP + + +++ 
Sbjct: 82  AETLLDAAAAARASVGRGQAEPQGRLRVSMPSSFGRQHVSPVIAAFLRRYPGVSVDLRLT 141

Query: 129 DKITDLIAGGFDLAIRIGELPDSSLIARKIAPCLSVICASPAYLTQHGLPMTPCELTQHN 188
           D I DL+  G D+ IR+G L DS+L+AR++A    VIC +P+YL + G    P +L QH 
Sbjct: 142 DTIVDLVDAGVDVGIRLGALKDSTLVARRLAANRRVICCAPSYLAERGTLHHPSDLAQHE 201

Query: 189 CLFYSYFQDGVEWSFHSPDGMQRVQPKGNYQVNNSDAINQACLDGLGIANLPRFIVEPDL 248
           C+  +   D  +WSF +P G   V+  G    +N + I  A L G GIA    + V P L
Sbjct: 202 CVILA---DQRDWSFVTPAGPLSVRVGGRLATDNGEVIRDALLAGFGIALKSTWDVAPYL 258

Query: 249 QTGHLQALLTDYPLPEH-GIYAVYPQRKYQPTKVTVLIEFLMAKLG 293
           ++G L ++L  YPL E   I+AVYP R + P K    I+FL A  G
Sbjct: 259 RSGELVSVLDSYPLAETVAIWAVYPSRAFVPPKTVAFIDFLAAHFG 304