Pairwise Alignments

Query, 295 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 309 a.a., LysR family transcriptional regulator from Magnetospirillum magneticum AMB-1

 Score =  219 bits (558), Expect = 6e-62
 Identities = 121/291 (41%), Positives = 170/291 (58%), Gaps = 2/291 (0%)

Query: 4   FSALPIFVTVVECGSFSLAGQKLGLSKSAISKRISQLEQHLGIQLLQRTTRSLSLTDAGA 63
           F  +  FV V E GSFS A ++LGLSKS IS+++S LE  LG++LL RTTRSLS T+AG 
Sbjct: 5   FDTIIAFVRVAETGSFSEAARRLGLSKSMISRQVSALEADLGVRLLHRTTRSLSPTEAGR 64

Query: 64  RYFEYIRPAVQLTQEGLDAISELQQTPRGNLRISVPMVFGRLYIAPLIAEFLKRYPDIQL 123
            Y E  +  +    E    +S LQ  PRG LR+S P+ FG  +++  +  FL+RYP+I+L
Sbjct: 65  AYLERCQRILADLDEANLLVSHLQAVPRGRLRVSAPLSFGIGHLSACLPGFLERYPEIEL 124

Query: 124 QMQMDDKITDLIAGGFDLAIRIGELPDSSLIARKIAPCLSVICASPAYLTQHGLPMTPCE 183
           +M   D+  DL+  G+DLA+RIG L DSSLI R++AP   +  ASPAYL + G P  P E
Sbjct: 125 EMGFTDRHVDLVEEGWDLAVRIGRLADSSLIVRRLAPVRRMAAASPAYLERRGTPRRPEE 184

Query: 184 LTQHNCLFYSYFQDGVEWSFHSPDGMQ-RVQPKGNYQVNNSDAINQACLDGLGIANLPRF 242
           L+ H+CL +       EW F   DG   +V+ +G +  +N D +    L GLG+  LP F
Sbjct: 185 LSAHDCLTHGGRVQS-EWRFTGDDGKPVQVEVRGRFHADNGDVLRDMALAGLGVVLLPSF 243

Query: 243 IVEPDLQTGHLQALLTDYPLPEHGIYAVYPQRKYQPTKVTVLIEFLMAKLG 293
            +  D++ G L  LL  Y   +  + AVYP  ++   KV   ++ L    G
Sbjct: 244 FLGDDIRAGRLVPLLEAYVPLDSSLNAVYPHGRHLSPKVRAFVDHLATSFG 294