Pairwise Alignments

Query, 295 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 306 a.a., LysR family transcriptional regulator from Serratia liquefaciens MT49

 Score =  223 bits (567), Expect = 5e-63
 Identities = 121/292 (41%), Positives = 179/292 (61%), Gaps = 3/292 (1%)

Query: 2   EHFSALPIFVTVVECGSFSLAGQKLGLSKSAISKRISQLEQHLGIQLLQRTTRSLSLTDA 61
           E+ + L +F  +V+CGSFS A +  G++ S +SKRI +LE+ LG +LL RTTRSL+LT+ 
Sbjct: 6   EYANDLILFALIVDCGSFSKAAETAGITSSVVSKRIGRLEKSLGARLLYRTTRSLTLTEN 65

Query: 62  GARYFEYIRPAVQLTQEGLDAISELQQTPRGNLRISVPMVFGRLYIAPLIAEFLKRYPDI 121
           G   +   +      Q+ L+ +SE      G +R+SVP + G L ++  +AEF  R+P++
Sbjct: 66  GRSLYRQAKEISAKIQDALNVVSENSDELTGVIRMSVPTISGELLLSESVAEFCARHPNL 125

Query: 122 QLQMQMDDKITDLIAGGFDLAIRIGELPDSSLIARKIAPCLSVICASPAYLTQHGLPMTP 181
           +++M+++++  DL+  G DLAIR G LPDSSLIAR I     VI  SP YL QH  P + 
Sbjct: 126 KVEMRLENRFADLVNEGIDLAIRTGTLPDSSLIARHILDSRWVIVCSPGYLQQHAEPHSA 185

Query: 182 CELTQHNCLFYSYFQDGVE-WSFHSPDG--MQRVQPKGNYQVNNSDAINQACLDGLGIAN 238
            +L +HNCL Y+Y + G + W    P G  +  +Q KGN   NN+ AI +A + G GIA 
Sbjct: 186 DDLLKHNCLTYTYQESGTDNWLMKPPGGGEIYELQVKGNLSANNARAIRKAAIGGYGIAM 245

Query: 239 LPRFIVEPDLQTGHLQALLTDYPLPEHGIYAVYPQRKYQPTKVTVLIEFLMA 290
           +PR +V  DLQ G L  +L+ +     G+YAVYP  +  P K  +LIE ++A
Sbjct: 246 VPRCMVFEDLQAGTLVEVLSGHCGKILGVYAVYPYTRNLPLKTRLLIEHIIA 297