Pairwise Alignments

Query, 295 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 308 a.a., LysR family transcriptional regulator from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  219 bits (559), Expect = 5e-62
 Identities = 120/291 (41%), Positives = 170/291 (58%), Gaps = 9/291 (3%)

Query: 6   ALPIFVTVVECGSFSLAGQKLGLSKSAISKRISQLEQHLGIQLLQRTTRSLSLTDAG--- 62
           AL IF  V +  SFS A + LGLSK+ +SK +++LEQ L   LL RT+R  +LTDAG   
Sbjct: 9   ALAIFAKVADSQSFSGAAETLGLSKATVSKAVTRLEQQLKTTLLHRTSRRFALTDAGRTL 68

Query: 63  -ARYFEYIRPAVQLTQEGLDAISELQQTPRGNLRISVPMVFGRLYIAPLIAEFLKRYPDI 121
            AR    +  A     E LD    +  TPRG +R++ PM FG  Y+AP + EFL  +PD+
Sbjct: 69  AARAAHMLAEAEGAVSEALD----MSVTPRGLVRLAAPMSFGMAYVAPALPEFLATHPDV 124

Query: 122 QLQMQMDDKITDLIAGGFDLAIRIGELPDSSLIARKIAPCLSVICASPAYLTQHGLPMTP 181
            + + + D++ DL+ GGFD A+RI  L DSSL ARK+ P    + ASP+YL Q G P  P
Sbjct: 125 SVDLHLSDEVIDLVGGGFDCALRIAALADSSLTARKLRPVARALVASPSYLDQRGRPTHP 184

Query: 182 CELTQHNCLFYSYFQDGVEWSFHSPDGMQ-RVQPKGNYQVNNSDAINQACLDGLGIANLP 240
            +L +H CL Y+Y      W F +  G +  V P+G  + NNSDA+  +   GLG+   P
Sbjct: 185 DDLARHACLGYAYMPSPDTWRFSNAAGEEVVVHPRGPLRANNSDALTASLCAGLGLFPQP 244

Query: 241 RFIVEPDLQTGHLQALLTDYPLPEHGIYAVYPQRKYQPTKVTVLIEFLMAK 291
            FI   D+  GHL+ ++TD+ LP   ++ V P    +P +VT  +++L AK
Sbjct: 245 DFIYWKDVADGHLETVMTDWRLPPIALHLVAPSGGPRPARVTAFMDYLAAK 295