Pairwise Alignments

Query, 92 a.a., DNA-directed RNA polymerase, omega subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 126 a.a., DNA-directed RNA polymerase subunit omega from Magnetospirillum magneticum AMB-1

 Score = 55.8 bits (133), Expect = 1e-13
 Identities = 30/54 (55%), Positives = 39/54 (72%), Gaps = 1/54 (1%)

Query: 1  MARVTVEDAVEQIGNRFDMILVAARRARQIAVQGKDPMVEEMNDKPTVIALREI 54
          MARVTVED V ++ NRF+++L+A +RAR I+  G    VE  NDK  V+ALREI
Sbjct: 1  MARVTVEDCVLKVPNRFELVLIAGQRARDISA-GAKLTVERDNDKNPVVALREI 53