Pairwise Alignments

Query, 701 a.a., guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 705 a.a., (p)ppGpp synthetase, RelA/SpoT family from Kangiella aquimarina DSM 16071

 Score =  815 bits (2106), Expect = 0.0
 Identities = 401/704 (56%), Positives = 536/704 (76%), Gaps = 13/704 (1%)

Query: 4   FEGLKESASGYLEPEQVELLKQAYQVARDAHEGQMRTSGEPYITHPVAVARILAEMRLDH 63
           FE L++   GYLEP QV  +++AY++A  AHEGQMR+SG+PYITHPVA A ILAE+ LDH
Sbjct: 7   FESLRDVLGGYLEPNQVADIERAYKLAERAHEGQMRSSGDPYITHPVAAAHILAELHLDH 66

Query: 64  ETLMAALLHDTIEDTYVTKEDLAERFGESVAELVEGVSKLDKLKFRDKKEAQAENFRKMM 123
           +T+MAAL+HD IED  VTK+DL   FGE+VA+LVEGVSKL ++ F+ K++AQAENFRKMM
Sbjct: 67  QTIMAALMHDVIEDCDVTKQDLTTEFGETVADLVEGVSKLTQIDFQSKEQAQAENFRKMM 126

Query: 124 MAMTQDIRVILIKLADRTHNMRTLGALRPDKRRRIARETLEIYAPIANRLGIHNIKTELE 183
           MAMTQDIRVILIKLADR HNM+TLGALRPDKRRRIARETLEIYAPIANRLGI+ +K +LE
Sbjct: 127 MAMTQDIRVILIKLADRLHNMQTLGALRPDKRRRIARETLEIYAPIANRLGIYRLKEQLE 186

Query: 184 DLGFQAYYPMRYRVLKEVVKAARGNRKELIQGIEAAVLTRLNDAGIKGKVKGREKNLYSI 243
            LGF   YP+RYR+L+  V+  RG+RKE+++ I   + TRL D+ I  KV GREK++YSI
Sbjct: 187 LLGFANMYPLRYRILQHSVRKVRGHRKEIVERITEQLRTRLKDSRITCKVIGREKSVYSI 246

Query: 244 YNKMQSKELQFQEVMDIYAFRVIVDSIDTCYRVLGAMHGLYKPRPGRFKDYIAIPKANGY 303
           Y KM+ K   F EVMDIYAFRVI DS D+CYR+LG +H L+KP PGRFKDYIAIPKANGY
Sbjct: 247 YKKMRDKVGTFNEVMDIYAFRVITDSEDSCYRILGQIHNLFKPIPGRFKDYIAIPKANGY 306

Query: 304 QSLHTSLFGPHGVPVEIQIRTEDMDQMADKGVAAHWAYKGGAETGQGTTTQVRARKWMQS 363
           QSLHT L    G+ +E+QIRTE M+QMA+ GVAAHW YK    TG     + +AR+W+QS
Sbjct: 307 QSLHTVLRNKTGMHIEVQIRTELMNQMAEHGVAAHWLYK----TGSAHPAETKAREWLQS 362

Query: 364 LLELQQSASTSFEFVENVKTELFPEEIYVFTPEGRILELPVNATAVDFAYEVHTDVGNTC 423
           L+ELQQ+A  S EFVENVK +L+P+E+YVFTP+G+I+ELP  AT VDFAY +HTDVGN+C
Sbjct: 363 LIELQQNAGDSIEFVENVKIDLYPDEVYVFTPKGKIIELPKGATPVDFAYAIHTDVGNSC 422

Query: 424 VGARVNRQAYPLSQPLISGQTVEIITAKGARPNAAWLNFVVTGKARAKIRQVLKSLKGDD 483
           +  ++++Q  PLS PL +G+TVEIITA GA+PN AWL++VVTGKAR+ IR  +K+++ D+
Sbjct: 423 IACKIDKQFSPLSTPLSNGKTVEIITAPGAKPNPAWLSYVVTGKARSNIRNFVKNIRQDE 482

Query: 484 AIALGRRLLNHALGKTKLDSIPAEQIEKVVRDTKHASLNALLADIGLGNAMSIVIAQRLI 543
           A+ LGRRLL   L K++L+  P EQ+E V + T H +++ +LA IGLG   S+++A RL 
Sbjct: 483 AVHLGRRLLEQVL-KSQLEDFPPEQLESVAKITHHDTVDDMLAGIGLGKIASVLVAHRLT 541

Query: 544 G------DNLENQESRDSHQMPIRGAEGMLVTFANCCRPIPGDAVIAHVSQGKGLVVHME 597
                  D + +   +D   + I+G EG++V +A CCRPIPGD ++A+VS GKG  +H E
Sbjct: 542 SGKDDSDDTVVDMPQKDQAPLAIKGTEGLVVKYARCCRPIPGDPILAYVSAGKGFTIHRE 601

Query: 598 NCANIRGYQSEPDKYIPVQW-DNVEGVEYQANLRVEIVNHQGALAKITSIIAAEGSNIHN 656
            C N++      D+Y+PVQW D+V+G ++ A LR+E+ N +G LA+IT+II+ + +NI N
Sbjct: 602 TCPNVQRAHKHNDRYVPVQWSDDVQG-DFIAELRIEVFNQRGVLAQITNIISNQEANIVN 660

Query: 657 LSTEERDGRVYLINLRISVKDRIHLANVMRRIRVLPEVLRTSRN 700
           +   E DG   ++  ++ V++R+HLAN+++++RV+P V +  R+
Sbjct: 661 VDINELDGSTNILTFQMGVRNRVHLANIIKKLRVIPFVNKVHRH 704