Pairwise Alignments

Query, 198 a.a., DNA-binding response regulator, LuxR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 210 a.a., response regulator transcription factor from Paraburkholderia sabiae LMG 24235

 Score =  107 bits (266), Expect = 2e-28
 Identities = 63/205 (30%), Positives = 112/205 (54%), Gaps = 9/205 (4%)

Query: 1   MKILLAEDQAMVRGALAALLTLAGGFTIT-QASDGDEALTLLKQQHFDLLLTDIEMPGRT 59
           ++IL+A+D A+VRG L  ++       +  +A+ G E +  L+    DLLL D+ MPG +
Sbjct: 2   IRILIADDHAIVRGGLRQIIATTSDIMVAAEAAQGTEVIDRLRSCVVDLLLLDMTMPGIS 61

Query: 60  GLELAAWLKEQHSQTKVVVITTFGRAGYIKRAIEAGVGGFLLKDAPSETLVSSIQQVMAG 119
           G++L   ++ +     V+V++    A    RA+ AG  G+L KD+  + L+++I+++  G
Sbjct: 62  GVDLIRRVRVEQPSLPVLVLSIHDEAQVASRALRAGATGYLTKDSDPDVLLAAIRKLTEG 121

Query: 120 KRVIDPELAMMAI-----GDIDP---LNDKERRALRFASEGKSTAEIADMLFIAEGTVRN 171
            R IDP+L    +     GD+ P   L+D+E + L+  + G S  EIAD   ++  T+  
Sbjct: 122 GRFIDPKLVDAMVFETQRGDVPPHEVLSDREFQVLQMLAAGGSINEIADACSLSAKTIST 181

Query: 172 YLSEAIAKLNASNRIDAARIAKQKG 196
           Y +  + KL  SN ++  R + + G
Sbjct: 182 YKTRLMQKLGLSNNVEMIRYSVRHG 206