Pairwise Alignments

Query, 198 a.a., DNA-binding response regulator, LuxR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 230 a.a., response regulator transcription factor from Paraburkholderia sabiae LMG 24235

 Score = 99.8 bits (247), Expect = 3e-26
 Identities = 62/213 (29%), Positives = 110/213 (51%), Gaps = 18/213 (8%)

Query: 2   KILLAEDQAMVRGALAALLTLAGGFTIT-QASDGDEALTLLKQQHFDLLLTDIEMPGRTG 60
           ++L+AEDQ ++RG L +++     +++  +A DG EA +L      DL+L D+ MPG++G
Sbjct: 6   RVLIAEDQPLLRGGLCSMVRRLQQYSVAGEARDGVEACSLAAALLPDLILMDLSMPGKSG 65

Query: 61  LELAAWLKEQHSQTKVVVITTFGRAGYIKRAIEAGVGGFLLKDAPSETLVSSIQQVMAGK 120
           ++  A +K    Q +++ +T      +++ A+ AGV G++LKDA  + LV +++ VM G+
Sbjct: 66  VDAIAQIKRHTPQIRIIALTIHASDMHMREALAAGVDGYVLKDASFDELVEAMRLVMLGR 125

Query: 121 RVIDPELAMMAIGDIDP---------------LNDKERRALRFASEGKSTAEIADMLFIA 165
           R  +P L        +P               L  +ER  LR  +EG +  E+ + L ++
Sbjct: 126 R--NPTLDEYGARHGEPPGLAANTEHAQTWSALTGRERSVLRLVAEGCTNREVGEQLRLS 183

Query: 166 EGTVRNYLSEAIAKLNASNRIDAARIAKQKGWL 198
             T+  + +  + KL  SN     R A   G L
Sbjct: 184 PKTIEKHRASLMRKLGVSNATGLVRAALDLGVL 216