Pairwise Alignments

Query, 198 a.a., DNA-binding response regulator, LuxR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 218 a.a., response regulator transcription factor RqpR from Paraburkholderia sabiae LMG 24235

 Score = 94.4 bits (233), Expect = 1e-24
 Identities = 59/198 (29%), Positives = 103/198 (52%), Gaps = 12/198 (6%)

Query: 1   MKILLAEDQAMVRGALAALLTLAG-GFTITQASDGDEALTLLKQQHFDLLLTDIEMPGRT 59
           ++IL+AED A+VR  +  LL   G    + +A  G E LT   +  FD++L DI +P   
Sbjct: 3   LRILIAEDHAIVRQGVRQLLIDRGVADDVAEAQTGTEVLTEASKHVFDVILLDISLPDMN 62

Query: 60  GLELAAWLKEQHSQTKVVVITTFGRAGYIKRAIEAGVGGFLLKDAPSETLVSSIQQVMAG 119
           G+E+   LK +  +  V++ + +    Y  RA++AG  G+L K   +  ++++IQQV AG
Sbjct: 63  GVEVLKRLKRKQPRVPVLMFSMYREDQYAVRALKAGAAGYLSKTGDATQMIAAIQQVAAG 122

Query: 120 KRVIDPELAMMAIGDI----------DPLNDKERRALRFASEGKSTAEIADMLFIAEGTV 169
           ++ + P +A  A+ D           + L+D+E + L   + GK   +IA  L ++  TV
Sbjct: 123 RKYVSPAMA-EALADYVSFDGEQLPHEKLSDREYQTLCMLASGKRLTDIAIALSLSVKTV 181

Query: 170 RNYLSEAIAKLNASNRID 187
             Y +  + K+   N  +
Sbjct: 182 SVYRTRLLEKMKLRNNAE 199