Pairwise Alignments

Query, 198 a.a., DNA-binding response regulator, LuxR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 209 a.a., Regulatory protein, LuxR:Response regulator receiver from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 99.4 bits (246), Expect = 4e-26
 Identities = 59/206 (28%), Positives = 109/206 (52%), Gaps = 10/206 (4%)

Query: 1   MKILLAEDQAMVRGALAALLTLAGGFTIT-QASDGDEALTLLKQQHFDLLLTDIEMPGRT 59
           +K++L +D AMVR  +   ++ A    +  +A    E   L+++   D+L+ D+ MPGR 
Sbjct: 2   IKVILCDDHAMVRRGIRDTISEATDIQVVGEAGSYPELRDLMRKSECDVLVLDLNMPGRG 61

Query: 60  GLELAAWLKEQHSQTKVVVITTFGRAGYIKRAIEAGVGGFLLKDAPSETLVSSIQQVMAG 119
           GLE+   LKE+ S  K +V++ +    Y  R + AG  G+L K      LV++I+ VM G
Sbjct: 62  GLEVLGTLKEEGSTVKTLVVSMYPEDQYAIRCLRAGARGYLNKAGEPAELVAAIRTVMQG 121

Query: 120 KRVIDPELAMMAIGDID---------PLNDKERRALRFASEGKSTAEIADMLFIAEGTVR 170
           ++ +  ++A M +  ++          L+++E + L+  + GK  +EIA+ L ++  TV 
Sbjct: 122 RKYVTADVAQMLVDTLNAPESEELHASLSERELQTLQKIASGKKLSEIAEELMLSPKTVS 181

Query: 171 NYLSEAIAKLNASNRIDAARIAKQKG 196
            Y +  + KL+ +N  +    A + G
Sbjct: 182 VYRARVLEKLHLANNAELTVYAIRNG 207