Pairwise Alignments

Query, 1515 a.a., sensory box protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 802 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Magnetospirillum magneticum AMB-1

 Score =  443 bits (1140), Expect = e-128
 Identities = 236/557 (42%), Positives = 343/557 (61%), Gaps = 5/557 (0%)

Query: 943  TRNITSRKLIENELVLSSQVLNSMNEAVVVAGLDYRIRSVNPAFSAITGYSEGQISDKFL 1002
            +R++T       +L      L     +V++      I  VN AF  ++GYSE ++  +  
Sbjct: 234  SRDVTQSHQRRQQLRKLETALEQAPVSVMITDSHGAIEYVNRAFVLVSGYSEDEVLGRNP 293

Query: 1003 IHLAYSRQQRDLFNSIEQQLLRHKHWAGEIWIRNKARRAILVW--LEINQVIDVKGETSH 1060
              L        L+  +   L     W GE+   N+A+   L W    I+ + D  G  +H
Sbjct: 294  RLLKSGETVASLYRDMWHCLASGATWQGELC--NRAKDGSLFWEYATISPIRDDDGVVTH 351

Query: 1061 FVAVFTDITERKKAEEDLRFLASFDTLTGLPNRTLFQDRLNHAISQAHRSNNIVALLFLD 1120
            F+AV  +IT+RK+ E+ L   A+ DTLTGLPNR L +DR++HAI  A R    + L+FLD
Sbjct: 352  FMAVKENITQRKETEQQLVHQATHDTLTGLPNRLLLEDRVHHAIEVAKREGRRIGLMFLD 411

Query: 1121 LDRFKHINDSMGHHIGDLLLKAVAHRLQSAVREGDTVARLGGDEFTIILEGVAKTKAATL 1180
            LDRFK +NDS+GH  GD LLK V+ RL+  +R  DTVARLGGDEF ++L     T     
Sbjct: 412  LDRFKIVNDSLGHVAGDELLKVVSDRLRHTLRRSDTVARLGGDEFVVVLTHFQSTTELAE 471

Query: 1181 ISEKVLKAFQAPFLLDDKSLNISTSIGISLYPNDAKDVDSLIKFADTAMYHAKALGRNNF 1240
            ++EK+  A   P  L    +++  SIGI++YP+D  + ++L+K ADTAMY AK  GRN F
Sbjct: 472  VAEKISAALDEPVELSGHKVHVGASIGIAIYPDDGDNFNALMKDADTAMYRAKQKGRNTF 531

Query: 1241 QFYTNKLNEMATRHMQLETGLKQAISHNELSLVYQPKFCLRNGSLTGLEALLRWQHSELG 1300
             FY + +N+ A   ++LE  L++A+   E  L YQP+  L+ G  +G+EAL+RW   E G
Sbjct: 532  CFYDSNMNDEALDRLKLEEALRRALVRGEFQLFYQPQVDLQTGRTSGVEALIRWNSPERG 591

Query: 1301 PISPAEFIPLAEETGMINQIGHWVINQSCQQLAEWNELGFSDISMAVNLSARQ-LKADII 1359
             +SPA FIP+AEE+ +I+ IG WV+ +SC+Q+A W E G + I +AVN+S RQ L   ++
Sbjct: 592  QVSPALFIPVAEESNLISMIGWWVLEESCRQIAAWREAGLTGIKVAVNVSGRQFLNHALV 651

Query: 1360 STIEVALAVSGLPAKALELELTESMIMGNPQESVNILSKLKALGLTIAVDDFGTGYSSLS 1419
              I   +A   +    LE+ELTES +M  P  ++  L++L+ +G+ ++VDDFGTGYSSLS
Sbjct: 652  ECISDLMAQYAVLPSQLEIELTESTVMAEPDRAIEQLTRLREIGIQVSVDDFGTGYSSLS 711

Query: 1420 YLKRFPIDTLKIDREFVRDITNDPDDAAITSAIIALAHSLELNVVAEGVETQEQLNFLAL 1479
            YLKR P+ T+K+DR FVRD+ N  D+AAI SAI+ LA +L++++VAEGVET+ +   L  
Sbjct: 712  YLKRLPLSTIKVDRSFVRDVNNQSDNAAIVSAILGLADALDMSIVAEGVETEGEEQHLKD 771

Query: 1480 QGCDQVQGFLLSKPLSA 1496
             GC +VQGF  +KP+ A
Sbjct: 772  AGCIKVQGFRYAKPMPA 788