Pairwise Alignments

Query, 1515 a.a., sensory box protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 831 a.a., DUF3365 domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  478 bits (1231), Expect = e-139
 Identities = 248/565 (43%), Positives = 355/565 (62%), Gaps = 2/565 (0%)

Query: 946  ITSRKLIENELVLSSQVLNSMNEAVVVAGLDYRIRSVNPAFSAITGYSEGQISDKFLIHL 1005
            +T + L + E  L++ V ++  EA ++     RI  +NP F+ +TGY E ++       +
Sbjct: 262  LTEKALADEETRLAAHVFSNALEATLITDPKGRILRINPMFTELTGYGEAEVVGGNPRII 321

Query: 1006 AYSRQQRDLFNSIEQQLLRHKHWAGEIWIRNKARRAILVWLEINQVIDVKGETSHFVAVF 1065
              +    D +  I Q + R   W GEIW R K  +  + W  I  V D  G   +F+  F
Sbjct: 322  RSNHHDADFYAEIWQAIFRDGRWQGEIWNRRKDGQVFVAWESIVAVYDEAGAIRYFIGSF 381

Query: 1066 TDITERKKAEEDLRFLASFDTLTGLPNRTLFQDRLNHAISQAHRSNNIVALLFLDLDRFK 1125
             DITE+ +A+  +  LA +D LT LPNR LFQDRL  A+  A R +   ALLFLDLD FK
Sbjct: 382  RDITEQVEAQRHILRLAHYDVLTDLPNRVLFQDRLERAVVHALRHDRQAALLFLDLDGFK 441

Query: 1126 HINDSMGHHIGDLLLKAVAHRLQSAVREGDTVARLGGDEFTIILEGVAKTKAATLISEKV 1185
             +ND+MGH  GD LLK VA RL+  VR  DT+ARLGGDEFT+IL+ ++    A+++++K+
Sbjct: 442  KVNDTMGHRAGDDLLKEVAVRLRGCVRMTDTIARLGGDEFTVILDEISAANDASMVADKI 501

Query: 1186 LKAFQAPFLLDDKSLNISTSIGISLYPNDAKDVDSLIKFADTAMYHAKALGRNNFQFYTN 1245
            L +  AP  +D + + I TSIGISL+P D    D L+K ADTAMY AKA G+  F FY+ 
Sbjct: 502  LASLHAPIFIDGRDVFIGTSIGISLFPIDGTSGDELLKHADTAMYQAKAAGKGRFNFYSA 561

Query: 1246 KLNEMATRHMQLETGLKQAISHNELSLVYQPKFCLRNGSLTGLEALLRWQHSELGPISPA 1305
            ++ +     ++LET L+QA+   +  + YQP+  L    ++G EAL+RWQH  LG ISP 
Sbjct: 562  EMTKREEHRLELETALRQAVEEGQFQVHYQPQKNLATNRVSGFEALVRWQHPRLGMISPV 621

Query: 1306 EFIPLAEETGMINQIGHWVINQSCQQLAEWNELGFSDISMAVNLSARQL-KADIISTIEV 1364
            +FIPLAEE  +I++I  +V+ Q+C++  +W + G+ DI MAVNLS     + D+   +  
Sbjct: 622  DFIPLAEEMHLIDRIDMFVMRQACRKGRQWRDQGY-DICMAVNLSGVNFSRDDLPEQVRQ 680

Query: 1365 ALAVSGLPAKALELELTESMIMGNPQESVNILSKLKALGLTIAVDDFGTGYSSLSYLKRF 1424
             L  +G PA+ LELE+TES ++    +   +L +L+ALG+ +A+DDFGTGYSSLSYLKR 
Sbjct: 681  VLEDTGFPAENLELEITESFVIDLEVDQREVLQRLRALGVKLAIDDFGTGYSSLSYLKRL 740

Query: 1425 PIDTLKIDREFVRDITNDPDDAAITSAIIALAHSLELNVVAEGVETQEQLNFLALQGCDQ 1484
            P++TLKIDR FVRDI  D  D  + S+II +AHSL L VVAEG+E ++QL  L  Q CD+
Sbjct: 741  PVNTLKIDRSFVRDIARDSRDMMLVSSIIGIAHSLGLKVVAEGIEERDQLAILLSQECDE 800

Query: 1485 VQGFLLSKPLSAQDCQTLLQQRTKD 1509
            +QG+L++KP+ A+     L   + D
Sbjct: 801  IQGYLIAKPMPAEQAGIFLNGASAD 825