Pairwise Alignments

Query, 484 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 489 a.a., Selenoprotein O and cysteine-containing homologs from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  372 bits (955), Expect = e-107
 Identities = 220/492 (44%), Positives = 282/492 (57%), Gaps = 32/492 (6%)

Query: 8   FTQLPE-FYSQVYPQGISNPHWLAWSDDAAALIGLHQP---TDELLQGLSGNAAVEGASY 63
           F  L E FY+   P  + +PHW+  S   A L+GL +    +   L   +GN  + G   
Sbjct: 15  FASLGEAFYTFRAPTPLPSPHWVGTSPAVADLLGLDRAWLASPAALDAFTGNLPIAGTQP 74

Query: 64  YAQVYSGHQFGGYTPRLGDGRSIILGEAIGPNGAWDVALKGGGPTPYSRHGDGRAVMRSA 123
            A VYSGHQFG +  +LGDGR+I+LGE   P+G  +V LKG G TPYSR GDGRAV+RS+
Sbjct: 75  LASVYSGHQFGHWAGQLGDGRAILLGEVDTPSGPQEVQLKGAGLTPYSRMGDGRAVLRSS 134

Query: 124 VREFLVSEALHHLGVPTTRALAVIGSDMPVWRESQETAAITVRLARSHIRFGHFEFFSHS 183
           +REFL SEA+H LG+PT+RAL V GS  PV RE  ETAA+  R+A S IRFGHFE FSH 
Sbjct: 135 IREFLCSEAMHALGIPTSRALCVTGSPAPVRREEIETAAVVTRVAPSFIRFGHFEHFSH- 193

Query: 184 ERGQADKLTQLLNFTLKQHYPHLSCDPAG---YKAWFLQVVQDSAKMIAHWQAIGFAHGV 240
             G   +L QL +F + + YP  +C  A    Y A    V   +A+M+A WQA+GF HGV
Sbjct: 194 -HGLHGELRQLADFVIDRFYP--ACREAAGNPYAALLEAVSARTAEMVAQWQAVGFCHGV 250

Query: 241 MNTDNMSILGDSFDFGPFAFLDTFQEDFICNHSDPDGRYAFGQQPGIGLWNLQRLAQALT 300
           MNTDNMSILG + D+GPF FLD F    +CNHSD  GRYA+ +QP I  WNL  L QAL 
Sbjct: 251 MNTDNMSILGLTIDYGPFQFLDAFNPGHVCNHSDTGGRYAYNRQPNIAYWNLFALGQALL 310

Query: 301 PVI-ASDDLIAALNQYQHALVQHYLALMRAKLGLVQQADSSAEQDQQDLELIGRFTVLME 359
           P++      + AL  Y+  +       M AKLGL +  D        D EL      LM 
Sbjct: 311 PLMDDQQQALDALEPYKALMPAALQRRMNAKLGLSRTEDG-------DAELTESLMKLMA 363

Query: 360 KNQLDYSHTWRRF-----GQLDPSSLHSSLRDDFIDLNEFDAWYQVYQARLGKVT--DVE 412
            + +D++  WRR      G LDP      +RD F+    FDAW   +Q RL   T  D  
Sbjct: 364 ADAVDFTIFWRRLSHAVAGALDP------VRDLFLQREAFDAWAVRWQERLRAETGFDAA 417

Query: 413 AWQQQCNRVNPKYILRNYLAQEAIIAVDEGNLAQLQRLHQVLRQPFTEQIEHEELAKRPP 472
           A Q +  R NP+ +LRN+L + AI    +G+ ++L RL   L  PF      E+LA  PP
Sbjct: 418 ATQARMLRTNPQVVLRNHLGEIAIQRAKQGDFSELARLQYALEHPFEALAGQEDLAAFPP 477

Query: 473 DWGQGLIMSCSS 484
           DW   + +SCSS
Sbjct: 478 DWASQIEISCSS 489