Pairwise Alignments

Query, 439 a.a., putrescine-ornithine antiporter (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 439 a.a., Putrescine/proton symporter, putrescine/ornithine antiporter PotE from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  657 bits (1696), Expect = 0.0
 Identities = 321/438 (73%), Positives = 382/438 (87%), Gaps = 4/438 (0%)

Query: 1   MSKSE-NKIGVVQLTIITIVNMMGSGIIMLPTQLAQVGTISVLSWLVTAAGSTALAFAFA 59
           MSK + NK+GVVQLTI+T+VNMMGSGIIMLPT+L++VGTIS++SWLVTA GS ALA+AFA
Sbjct: 1   MSKPKSNKMGVVQLTILTMVNMMGSGIIMLPTKLSEVGTISIISWLVTAVGSMALAWAFA 60

Query: 60  KCGMFSKKSGGMGGYAEYAFGRSGNFMANYTYAVSLLIANVAIAISAVGYAAVLLEVNLS 119
           KCGMFS+KSGGMGGYAEYAFG+SGNFMANYTY VSLLIANVAIAISAVGY   L    L+
Sbjct: 61  KCGMFSRKSGGMGGYAEYAFGKSGNFMANYTYGVSLLIANVAIAISAVGYGTELFGAALT 120

Query: 120 PMAICLATIGVLWLATVANFGGARITGRVSSVTVWGIILPVIGVSLIGWFWFDIDLYKGA 179
           P+ I LATI VLW+ T+ANFGGARITG++SSVTVWG+I+PV+G+ +IGWFWF   +Y  +
Sbjct: 121 PLQIGLATIAVLWVCTIANFGGARITGQISSVTVWGVIIPVVGLCIIGWFWFSPSMYVAS 180

Query: 180 WNPHDMPFFKALGGSIAMTLWAFLGLESACANSEAVDNPEKNVPIAVMGGTLGAALIYIV 239
           WNPH +PFF A+G SIAMTLWAFLGLESACAN++ V+NPEKNVPIAV+GGTLGAA+IYIV
Sbjct: 181 WNPHHVPFFSAVGSSIAMTLWAFLGLESACANADVVENPEKNVPIAVLGGTLGAAVIYIV 240

Query: 240 STNVIAGIVPNAELASSNAPFGLAFAQMFNPVVGKIVMACAIISCTGSLLGWQFTIAQVF 299
           STNVIAGIVPN +LA+S APFGLAFAQMF P VGK++MA  ++SC GSLLGWQFTIAQVF
Sbjct: 241 STNVIAGIVPNMDLANSTAPFGLAFAQMFTPAVGKVIMALMVMSCCGSLLGWQFTIAQVF 300

Query: 300 KASADEGFFPKVFAKVSKADAPIWGMTIIVSIQTLLSLMTISPSLSKQFEALVNLAVVTN 359
           K+SADEG+FPKVF++V+K DAP+ GM IIV IQT LSLMTISPSL+ QF  LVNLAVVTN
Sbjct: 301 KSSADEGYFPKVFSRVTKVDAPVQGMLIIVIIQTGLSLMTISPSLNSQFNVLVNLAVVTN 360

Query: 360 IVPYILSMAALGVMQKQLKVPANKARVANVIAVIGALYSFYALYSSGETAVMLGAIATFF 419
           I+PYILSMAAL ++QK   VP++KA+VAN +A +GA+YSFYALYSSGE A++ G+I TF 
Sbjct: 361 IIPYILSMAALVIIQKMANVPSSKAKVANFVAFVGAMYSFYALYSSGEEAMLYGSIVTFL 420

Query: 420 GWTIYGVISNKTPSVEIK 437
           GWT+YG++S   P  E+K
Sbjct: 421 GWTLYGLVS---PRFELK 435