Pairwise Alignments

Query, 439 a.a., putrescine-ornithine antiporter (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 443 a.a., Lysine/cadaverine antiporter membrane protein CadB from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  218 bits (556), Expect = 2e-61
 Identities = 136/430 (31%), Positives = 223/430 (51%), Gaps = 21/430 (4%)

Query: 4   SENKIGVVQLTIITIVNMMGSGIIMLPTQLAQVGTISVLSWLVTAAGSTALAFAFAKCGM 63
           S  KIG+   T +   NMMGSGI +LP  LA +G I++  W+++  G+ +LA+ +A+   
Sbjct: 3   SVKKIGLFACTGVVAGNMMGSGIALLPANLASIGGIAIWGWVISIIGAMSLAYVYARLAT 62

Query: 64  FSKKSGGMGGYA---EYAFGRSGNFMANYTYAVSLLIANVAIAISAVGYAAVLLEVNLSP 120
            + + GG   YA     AFG    F     Y  +  I N+AI I+AV Y +       +P
Sbjct: 63  KNPQQGGPIAYAGEISPAFG----FQTGVLYYHANWIGNLAIGITAVSYLSTFFPALNNP 118

Query: 121 MAICLATIGVLWLATVANFGGARITGRVSSVTVWGIILPVIGVSLIGWFWFDIDLYKGAW 180
           +   +A I ++WL T  N  G     R++++ ++ +++PV+  ++ GW WFDI  Y   W
Sbjct: 119 IPAGIACIAIVWLFTFINMLGGAWVSRLTTIGLFLVLIPVVLTAVAGWHWFDIATYHANW 178

Query: 181 NPHDMPFFKALGGSIAMTLWAFLGLESACANSEAVDNPEKNVPIAVMGGTLGAALIYIVS 240
           N        A+  SI + LWAF+G+ESA  ++  V NP++ VP+A M GT  A +IYI +
Sbjct: 179 NTSTTTDSHAIVKSILLCLWAFVGVESAAVSTGMVKNPKRTVPLATMLGTALAGIIYIAA 238

Query: 241 TNVIAGIVPNAELASSNAPFGLAFAQMFNPVVGKIVMACAIISCTGSLLGWQFTIAQVFK 300
           T VIAG+ P + +ASS APF ++ + +       +V A    +C  SL  W   + Q   
Sbjct: 239 TQVIAGMFPASVMASSGAPFAISTSTILGGWAAPLVSAFTAFACLTSLGSWMMLVGQAGV 298

Query: 301 ASADEGFFPKVFAKVSKADAPIWGMTI-IVSIQTLLSLMTISPS----LSKQFEALVNLA 355
            +A++G FPK++ ++ K   P  G+ +  V +  L+ L+TI  S     S  F  L  +A
Sbjct: 299 RAANDGNFPKIYGEMDKNGIPKKGLLLAAVKMTALMILITIMNSSGGKASDLFGELTGIA 358

Query: 356 VVTNIVPYILSMAALGVMQKQLKVPANKARVANVIAVIGALYSFYALYSSGE-----TAV 410
           V+  ++PY  S   L +  +   +   +  V+ + +V+G  + F AL  +       T +
Sbjct: 359 VLLTMLPYFYSCVDL-IRFEGFNI---RNSVSLICSVLGCAFCFIALMGASSFELSGTFI 414

Query: 411 MLGAIATFFG 420
           +   I  F+G
Sbjct: 415 VSLIILMFYG 424