Pairwise Alignments

Query, 786 a.a., hypothetical Fe-S oxidoreductase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 739 a.a., hypothetical protein (NCBI) from Escherichia coli BW25113

 Score = 1050 bits (2715), Expect = 0.0
 Identities = 512/735 (69%), Positives = 596/735 (81%), Gaps = 18/735 (2%)

Query: 1   MQVESTLFSHPKYWAECFGTAPFLPMSRKEMEKLGWDSCDIIIVTGDAYVDHPSFGMAVI 60
           +Q +  LFS P+YWA CFG APFLPMSR+EM++LGWDSCDII+VTGDAYVDHPSFGMA+ 
Sbjct: 7   IQPDRDLFSWPQYWAACFGPAPFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAIC 66

Query: 61  GRMLEAQGYRVGIIAQPDWSSKDAFMQLGRPNLFFGVTAGNMDSMINRYTADRRIRSDDA 120
           GRMLEAQG+RVGIIAQPDWSSKD FM+LG+PNLFFGVTAGNMDSMINRYTADRR+R DDA
Sbjct: 67  GRMLEAQGFRVGIIAQPDWSSKDDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDA 126

Query: 121 YTPGDVGGKRPDRAVTVYTQRCKEAFKDVPVIIGGIEASLRRIAHYDYWSDKVRRSVIFD 180
           YTP +V GKRPDRA  VYTQRCKEA+KDVPVI+GGIEASLRR AHYDYWSD VRRSV+ D
Sbjct: 127 YTPDNVAGKRPDRATLVYTQRCKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVD 186

Query: 181 AKADILMYGNAERPLAEVARRLAAGEAIADIQDVRGTAVIRKEPMPEWRGMDSRKIDQLH 240
           +KAD+LM+GN ERPL EVA RLA GE I++I+DVR TA+I KE +P W G+DS ++D   
Sbjct: 187 SKADMLMFGNGERPLVEVAHRLAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPG 246

Query: 241 KIDPIPNPYGADDVGCANLSGPSDAKIFDNDAPKPISVQPPRPKPWDKTYVLLPAFEKVS 300
           KIDPIP+PYG +D+ CA+    +  K       K ++VQPPRPKPW+KTYVLLP+FEKV 
Sbjct: 247 KIDPIPHPYG-EDLPCADNKPVAPKK----QEAKAVTVQPPRPKPWEKTYVLLPSFEKVK 301

Query: 301 EDKYLYAHASRILHQEQNPGCARALFQPHGDRGVWVNPPAWPLNTDEMDAVFDLPYKRVP 360
            DK LYAHASRILH E NPGCARAL Q HGDR VW+NPPA PL+T+EMD+VF LPYKRVP
Sbjct: 302 GDKVLYAHASRILHHETNPGCARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVP 361

Query: 361 HPAYGKEKIPAYDMIKTSINIMRGCFGGCSFCSITEHEGRIIQSRSQESIIKEIKDIQDK 420
           HPAYG  +IPAY+MI+ S+NIMRGCFGGCSFCSITEHEGRIIQSRS++SII EI+ I+D 
Sbjct: 362 HPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDT 421

Query: 421 VPGFTGVISDLGGPTANMYRLGCTSEKAEKTCRRLSCVYPSICGHLGTDHKHTIDLYRAA 480
           VPGFTGVISDLGGPTANMY L C S +AE+TCRRLSCVYP IC H+ T+H+ TI+LYR A
Sbjct: 422 VPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRA 481

Query: 481 RAVPGIKKILIASGVRYDLAIEDPAYVKELVQHHVGGYLKIAPEHTEEGPLSKMMKPGMG 540
           R + GIKKILIASGVRYD+A+EDP Y+KEL  HHVGGYLKIAPEHTEEGPLSKMMKPGMG
Sbjct: 482 RDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMG 541

Query: 541 AYDKFKELFDKFSKEAGKEQFLIPYFISAHPGTTDEDMLNLALWLKERKFKLDQVQNFYP 600
           +YD+FKELFD +SK+AGKEQ+LIPYFISAHPGT DEDM+NLALWLK+ +F+LDQVQNFYP
Sbjct: 542 SYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYP 601

Query: 601 SPMANATTIYHTELNSLKNVKHTSEVVPVPKKGRQRRLHKALLRYHDPAGWPIIREGLIA 660
           SP+AN+TT+Y+T  N L  + + SE V VPK  +QRRLHKALLRYHDPA WP+IR+ L A
Sbjct: 602 SPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEA 661

Query: 661 MGREDLIGNSPNHLVPP-----------EGRNERG--PKWMKDANQGQKALTRFSGNQFD 707
           MG++ LIG+  + LVP            + RN R    K    A Q Q   T    +   
Sbjct: 662 MGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPALTKHTPMATQRQTPATAKKASSTQ 721

Query: 708 ERKGKGDAKGKPSAS 722
            R     AK +P A+
Sbjct: 722 SRPVNAGAKKRPKAA 736