Pairwise Alignments

Query, 406 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 426 a.a., threonine/serine exporter family protein from Rhodanobacter sp000427505 FW510-R12

 Score =  187 bits (474), Expect = 7e-52
 Identities = 122/421 (28%), Positives = 214/421 (50%), Gaps = 16/421 (3%)

Query: 1   MDNEQFLE-----KRKFIIKLGKALHKFGTPAYRLETHLQTVSRTLGIEGYFLISPTSMT 55
           +D EQF       +  F+++L + LH++GT A RLE  +   ++ LG+      SPT++ 
Sbjct: 7   IDREQFATTALTTRIAFVLELARRLHQYGTSAPRLEMAIAGAAQRLGMSADVWSSPTAII 66

Query: 56  FVLQHDTDQEYN-----HVARVKPGELDLGSLARTDELVDELTSGKRTLTEALDRLEEIA 110
                    E        V R+ PGE++L  L + D++ D   +G+  L E   RL E+ 
Sbjct: 67  ISFADLAQGEEGVAQTTQVMRLAPGEVNLERLCQADDIADRAIAGELGLREGFRRLRELG 126

Query: 111 NKPNPYGPVLTCFSFGTSAAAFAML-MGTGWNDVFWSGLLGLLVYGFVYRAERSSRMAEV 169
                   + +  S+G SAA+ A L + + W D+  +G +G  +      A    R+A  
Sbjct: 127 RPDTRREKIGSIASYGLSAASIAALFLHSAWVDLVVAGAIGAGIGWITLLAGSRPRLAVA 186

Query: 170 LEPFATIVCAIVACAIARIDPNINIPVVILSSIIIFIPGLALTLGLAELAARDLISGTAR 229
            +    +V   VA  ++     + I  V+L+S+II +PG++LT  + E+++  L+SGTAR
Sbjct: 187 SDAICALVATTVAIVVSAFVVPLAIKSVVLASLIILVPGMSLTNAVREISSGHLVSGTAR 246

Query: 230 IMDASMLLFKLYFGAVLGMAIGKAMFGEAIYIEPEGLPRWAIWSAVPILSMALVFIFKAR 289
           +  A   L KL FG +    +  A+   A       LP W  + A+ + ++A   +F+A 
Sbjct: 247 MGGAMSTLLKLTFGTIAATQLCAAVGITARDFALPALPAWTDYPALLVAAVAFAILFRAA 306

Query: 290 MQDSPWGVLAGIVAFFSAMLGGHFFGD----SVGIFFGALAVGVYSNLYARWMKAPASIA 345
            +D P  ++A ++ + +   GG   G      VG+F G L +G  +N+YAR+   P ++ 
Sbjct: 307 RRDWPVVIVAVVLGYLATRWGGAISGSLPGAPVGVFLGGLLLGALANVYARFAHRPGAVV 366

Query: 346 LLQGIVILVPGSKTYIGLNALISGETMLNQSHIGSQIFLIFMSLIAGLIFANVVVPPRRT 405
              GI++LVPGS  +  ++ L+  +T  +    G  +  + +SL+AGL+F +++V PRR+
Sbjct: 367 REPGILLLVPGSVGFRSVSLLLERDTTPSLD-TGLLLVTLLVSLVAGLMFGDLLVSPRRS 425

Query: 406 L 406
           L
Sbjct: 426 L 426