Pairwise Alignments

Query, 301 a.a., ornithine carbamoyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 334 a.a., Ornithine carbamoyltransferase (EC 2.1.3.3) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  191 bits (484), Expect = 3e-53
 Identities = 117/322 (36%), Positives = 173/322 (53%), Gaps = 26/322 (8%)

Query: 2   KHFLSIKELTQQQLLDLITLAKTIKANPAE--YRHALDGKSVVMLFEKPSLRTRVSFDIG 59
           ++FL + + T  ++  LI LA  +KA       +  L GK++ ++FEK S RTR +F++ 
Sbjct: 8   RNFLKLLDYTPAEIQHLIDLAIELKAAKKAGCEKQTLIGKNIALIFEKTSTRTRCAFEVA 67

Query: 60  INKFGGHCLYLDQQNGALGKRESVADFASNLSCWADAIVARTYSHTTIEQLAEFGTVPVI 119
               G    YL      +G +ES+ D A  L    D I  R +    +E+L E+  VPV 
Sbjct: 68  AFDQGAQVTYLGPSGSQIGHKESMKDTARVLGRMYDGIEYRGFGQHIVEELGEYAGVPVW 127

Query: 120 NALSDLYHPCQALADFLTLAEHF--ENISDVKLAYVGDG-NNVTNSLMYCAAILGATMTV 176
           N L+D +HP Q LAD +T+ EH   + + ++  AY+GD  NN+ NSLM  AA +G  + +
Sbjct: 128 NGLTDEFHPTQILADLMTMLEHAPGKTLPELSFAYLGDARNNMGNSLMVGAAKMGMDIRL 187

Query: 177 ICPAGHFPDGYVVAEVQELASRYGGKIVLTSDI-DAIEGHDAIYTDTWISMGDPTPL-AE 234
           I P   +PD  +VA+ +E+AS  G +I LT  + D + G D +YTD W+SMG+P    AE
Sbjct: 188 IAPKSFWPDAALVAQCREIASVTGARITLTESVEDGVHGVDFLYTDVWVSMGEPKEAWAE 247

Query: 235 IKDKFAPYQVNNALMAKAGAH--FFMHCLPAH-----------------RGVEVTDAVMD 275
                 PYQVN  ++   G     FMHCLPA                  +G+EVT+ V +
Sbjct: 248 RVSLMTPYQVNQQVVNATGNPDVKFMHCLPAFHNEHTKVGREIEMAYGLKGLEVTEEVFE 307

Query: 276 GECSLILQQAENRMHAQNAVLV 297
              S++  +AENRMH   AV+V
Sbjct: 308 SAGSIVFDEAENRMHTIKAVMV 329