Pairwise Alignments

Query, 183 a.a., transcription antitermination protein NusG (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 181 a.a., transcription termination/antitermination protein NusG from Dickeya dianthicola 67-19

 Score =  287 bits (734), Expect = 8e-83
 Identities = 139/183 (75%), Positives = 161/183 (87%), Gaps = 2/183 (1%)

Query: 1   MTEAKEAKKRWYVVQAFSGYEGRVCKSLIEYIKMHGMEQYFGEVLVPTEEVIEMRAGQRR 60
           M+EA   KKRWYVVQAFSG+EGRV +SL E+IK+H ME +FGEV+VPTEEV+E+R GQRR
Sbjct: 1   MSEAP--KKRWYVVQAFSGFEGRVAQSLREHIKLHNMEDHFGEVMVPTEEVVEIRGGQRR 58

Query: 61  KSERKFFPGYVLVQMEMNDDSWHLVKSIPRVLGFIGGTSDRPAPISDREADAILRRLQET 120
           KSERKFFPGYVLVQM M+D SWHLV+S+PRV+GFIGGTSDRPAPISD+E DAI+ RLQ+ 
Sbjct: 59  KSERKFFPGYVLVQMMMDDASWHLVRSVPRVMGFIGGTSDRPAPISDKEVDAIMNRLQQV 118

Query: 121 TASPTHRVIFEPGEVVRVCDGPFADFNGTVEEVDYDKSRVKVSVMIFGRSTPVELDFSQV 180
              P  + +FEPGE+VRV DGPFADFNG VEEVDY+KSR+KVSV IFGR+TPVELDFSQV
Sbjct: 119 GDKPRPKTLFEPGEMVRVNDGPFADFNGVVEEVDYEKSRLKVSVSIFGRATPVELDFSQV 178

Query: 181 EKG 183
           EKG
Sbjct: 179 EKG 181