Pairwise Alignments

Query, 183 a.a., transcription antitermination protein NusG (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 191 a.a., transcription termination/antitermination protein NusG from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  189 bits (481), Expect = 2e-53
 Identities = 92/188 (48%), Positives = 133/188 (70%), Gaps = 6/188 (3%)

Query: 1   MTEAKEAKK-----RWYVVQAFSGYEGRVCKSLIEYIKMHGMEQYFGEVLVPTEEVIEMR 55
           MT+A  AK      +WY+V A+S +E +V + L +  K  G+E  F E+LVPTE+V+E+R
Sbjct: 1   MTDAAPAKPANPRHKWYIVNAYSNFEKKVAEQLRDQAKQQGLEDAFSEILVPTEDVVEIR 60

Query: 56  AGQRRKSERKFFPGYVLVQMEMNDDSWHLVKSIPRVLGFIGGT-SDRPAPISDREADAIL 114
            G++  SERKFFPGYVLV+MEM D ++HLVK+ P+V GF+G     +P P+S+RE   I+
Sbjct: 61  RGRKVNSERKFFPGYVLVKMEMTDQAYHLVKNTPKVTGFLGAAGGTKPLPVSEREVQNII 120

Query: 115 RRLQETTASPTHRVIFEPGEVVRVCDGPFADFNGTVEEVDYDKSRVKVSVMIFGRSTPVE 174
             ++E    P   + F+ GE V+V DGPFA F+G+VE VD + +R++V+V IFGR+TPVE
Sbjct: 121 GAVEEGVERPKPTIRFDIGEKVKVIDGPFASFDGSVESVDEEHARLRVAVSIFGRATPVE 180

Query: 175 LDFSQVEK 182
           L+++QVEK
Sbjct: 181 LEYAQVEK 188