Pairwise Alignments

Query, 368 a.a., fatty acid desaturase, family 1 (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 408 a.a., Fatty acid desaturase (EC 1.14.19.1); Delta-9 fatty acid desaturase (EC 1.14.19.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 60.1 bits (144), Expect = 1e-13
 Identities = 70/339 (20%), Positives = 130/339 (38%), Gaps = 37/339 (10%)

Query: 20  SAVILVPWYGIV----YGYGASEW----IAFVVLAFASGLSITAGYHRLWSHKAYKTHPA 71
           S +    W G++    +G   + W    I  +V    +  S+T   HR  +H++   HP 
Sbjct: 6   SGIFSAVWDGLIQFLAHGLTGAAWWQVLIVALVFTHITIASVTIYLHRHSAHRSLDLHPI 65

Query: 72  IRFLYALGGALALQNSALHWASDHRVHHKHVDDNDKDPYSAKMGFWYSHIGWMLREYQAQ 131
               +     +        W + HR HH   + ++ DP+S  + F    + +   E    
Sbjct: 66  ASHFFRFWLWMTTGMVTKEWTAIHRKHHAKCE-HEGDPHSPHI-FGIKKVFYEGAELYRA 123

Query: 132 RYHDYQNVRDLQNDRIVMWQHKHYLT--------LVLLMNIGLPALLGWFTGNIAGMLLM 183
              + + +    ++    W  K+  T        L+L++N+ L  +LG         L +
Sbjct: 124 EAKNAETMERYGHNTPNDWIEKNLYTGRSRLGVSLMLIINVALFGVLG---------LSV 174

Query: 184 AGLLRLVVVHHCTFFINSLAHVWGCQPYTDKNTARDNGFLAVLTYGEGYHNFHHIFENDY 243
             L    +       IN + H WG + +   + + +     ++  GE  HN HH +    
Sbjct: 175 WALQMAWIPITAAGIINGIGHWWGYRNFEAADGSTNVSPWGIIIGGEELHNNHHTYPTSA 234

Query: 244 RNGIKWWHYDPTKWLIKSLSWVGLAKDLRTSPQERIESAR-----LQMQLLHAKNKVLNL 298
           +  +K + +D     I  L  VGLA   +  P+    + R       ++ + A    +  
Sbjct: 235 KLSVKPYEFDIGWMYITMLKSVGLASVKKVPPKMAYGAVRPVADEKTLEAIIANRYEVMA 294

Query: 299 PNADEIIEKIQQEYELMKQHLLEYYQAQKTLLEAKRKQL 337
             A E+    QQE E +KQ      +   T+L+A R+ L
Sbjct: 295 GYAREMRVACQQELEALKQR-----RGDATVLQAARRWL 328