Pairwise Alignments

Query, 220 a.a., HAD-superfamily hydrolase, subfamily IA, variant 3 protein family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 224 a.a., hydrolase from Agrobacterium fabrum C58

 Score = 45.8 bits (107), Expect = 6e-10
 Identities = 51/204 (25%), Positives = 85/204 (41%), Gaps = 29/204 (14%)

Query: 10  VLLDMDGTLLDLHFDNHFWLSLVPQELSRQRGL--SQDQAHKLVVESYSKVAGTLNWYCI 67
           V+ DMDG L++             + L R   L  S++  H + VE+Y KV G+  W  I
Sbjct: 9   VVFDMDGLLIE------------SETLYRDSFLAASEEGGHGMKVETYQKVCGS-PWDVI 55

Query: 68  ------DY-----WQTELQLDIMGLHRTLVDRIQLRQDSMPFLDALKAAGKKRILVTNAH 116
                 DY       T     +  L   + D + L+   +  LD L     +R + T++ 
Sbjct: 56  TGTIFADYGADFPMATFRDAWLRHLGLMMADGVALKPGVVEILDLLDRLDIRRAIATSSR 115

Query: 117 PKSLALKLEHTELGSGLDAMISSHETGYPKEHPQFWQTLFKQFALVPEHCLFIDDSEPIL 176
             S+   L   +L    D +++  +   PK  P  + T  ++  L P  CL ++DS   +
Sbjct: 116 HDSVTRHLGPYDLLRRFDTIVARGDYTEPKPAPMPYLTAARRLRLDPGRCLALEDSYSGV 175

Query: 177 NAARLAGVGHQLGISNPDSQKPAK 200
            +A  AG+   + I  PD   P +
Sbjct: 176 RSATSAGM---MTIMVPDVAPPTE 196