Pairwise Alignments

Query, 158 a.a., general secretion pathway protein M (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 170 a.a., hypothetical protein from Pseudomonas sp. S08-1

 Score = 53.5 bits (127), Expect = 2e-12
 Identities = 37/142 (26%), Positives = 70/142 (49%), Gaps = 2/142 (1%)

Query: 4   LRAWWQGLASREQQIVGFGAVFLVIGVFYWGIWTPIANAEANALRNLTAQQQTLTYVKQT 63
           L A WQG+ +R++  +     FL + + Y  +W P++     A   L  Q+    Y+++ 
Sbjct: 17  LTARWQGMPARDRLALVLLGGFLALVLLYLLLWRPVSQNLEQARSFLQQQRALHAYLQEH 76

Query: 64  ANKIAGLKQSGAKPTMSGSLSSVVNQTAGSYGLVITRMQPQGD-KIQVWMDDVPFDALLN 122
           A ++  L+        + +L  +V  +A S GL + R+  QGD  +QV +    F  LL 
Sbjct: 77  APQVRALQGRPQVSIDATALQGLVTGSAASQGLNVERLDNQGDGGLQVSLQPTEFARLLR 136

Query: 123 YLSDLVQKKGLSLESVDLAEAD 144
           +L  L +++G+ ++   L  A+
Sbjct: 137 WLVSL-EEQGVRVDEAGLERAE 157