Pairwise Alignments

Query, 158 a.a., general secretion pathway protein M (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 164 a.a., type II secretion system protein M from Pectobacterium carotovorum WPP14

 Score = 89.0 bits (219), Expect = 3e-23
 Identities = 52/158 (32%), Positives = 89/158 (56%), Gaps = 2/158 (1%)

Query: 1   MDNLRAWWQGLASREQQIVGFGAVFLVIGVFYWGIWTPIANAEANALRNLTAQQQTLTYV 60
           M+ LR  WQ ++ RE+Q++   A  L++ V Y+ I  P    E    R ++ +QQT+ ++
Sbjct: 1   MNELRQRWQAMSQRERQLMVVCAAVLLLCVVYYAILQPWQEREDLWERTISREQQTVNWM 60

Query: 61  KQTANKIA-GLKQSGAKPTMSGSLSSVVNQTAGSYGLVITRMQPQGDKIQVWMDDVPFDA 119
           ++ A+ I  G +  G       SL  +++Q+   YGL + R+QPQG +  V +    F++
Sbjct: 61  QKQASSIPQGNQAQGDNSQRDVSLPILISQSTKRYGLTVVRLQPQGSQASVTLGQSDFNS 120

Query: 120 LLNYLSDLVQKKGLSLESVDL-AEADAPGYVKVRRIQL 156
           LL +L +L QK G+ + S+D+ A   +PG V V R+ L
Sbjct: 121 LLRWLGELEQKNGVKVISLDVNAVEQSPGIVDVTRLML 158