Pairwise Alignments

Query, 158 a.a., general secretion pathway protein M (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 160 a.a., Type II secretory pathway, component PulM from Kangiella aquimarina DSM 16071

 Score = 67.8 bits (164), Expect = 8e-17
 Identities = 49/154 (31%), Positives = 87/154 (56%), Gaps = 9/154 (5%)

Query: 1   MDNLRAWWQGLASREQQIVGFGAVFLVIGVFYWGIWTPIANAEANALRNLTA-QQQTLTY 59
           M  L+ W+ GL  RE+ +V    V L I + +  +  P+ N   +   +L+  + Q +T 
Sbjct: 1   MSALKTWYSGLQERERNMVIALGVALAILLIFLLVVLPLKNYFNSLNDDLSYYENQAITI 60

Query: 60  VKQTANKIAGLKQSGAKPTMSG--SLSSVVNQTAGSYGLVITRMQPQ--GDKIQVWMDDV 115
            KQ    +A +K +G     +   SL+ +VNQTA S+GL  +R++ +    +IQ+ +D+V
Sbjct: 61  EKQ----VAAIKSAGPGKVTNDNISLNQLVNQTAKSFGLSFSRIEERERNKEIQLRLDNV 116

Query: 116 PFDALLNYLSDLVQKKGLSLESVDLAEADAPGYV 149
            FD LL ++S L Q +GL ++++ +++ DA G V
Sbjct: 117 EFDQLLRWISLLEQGRGLVVDTLRVSKKDAVGRV 150