Pairwise Alignments

Query, 158 a.a., general secretion pathway protein M (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 178 a.a., Type II secretion system protein M from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score = 74.3 bits (181), Expect = 9e-19
 Identities = 46/152 (30%), Positives = 82/152 (53%), Gaps = 8/152 (5%)

Query: 10  GLASREQQIVGFGAVFLVIGVFYWGIWTPIANA---EANALRNLTAQQQTLTYVKQTANK 66
           G + RE+ ++    VFL    +Y  IW P++     +   L+ L A     T ++  A  
Sbjct: 31  GRSPREKGMLLAAVVFLFSVGYYVLIWQPLSERIEQQETMLQQLVAMN---TRLRSAAPD 87

Query: 67  IAGLKQSGAKPTMSGSLSSVVNQTAGSYGLVITRMQPQGDKIQVWMDDVPFDALLNYLSD 126
           I   ++S    T    +S V++ +A ++ +VI R+  +G+ IQVW+D V F+ LLN+L+ 
Sbjct: 88  IIAARKSAT--TTPAQVSRVISDSASAHSVVIKRIAERGENIQVWIDPVVFNDLLNWLNA 145

Query: 127 LVQKKGLSLESVDLAEADAPGYVKVRRIQLAQ 158
           L +K  L +  +D + A+ PG V V+R++  +
Sbjct: 146 LDEKYALRVTQIDASAAEKPGMVNVQRLEFGR 177