Pairwise Alignments

Query, 158 a.a., general secretion pathway protein M (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 162 a.a., type II secretion system protein M from Dickeya dadantii 3937

 Score = 72.4 bits (176), Expect = 3e-18
 Identities = 45/160 (28%), Positives = 89/160 (55%), Gaps = 6/160 (3%)

Query: 1   MDNLRAWWQGLASREQQIVGFGAVFLVIGVFYWGIWTPIANAEANALRNLTAQQQTLTYV 60
           M+ LR  WQ ++ RE+ +       +++ + Y+  W P           +  ++QT+ ++
Sbjct: 1   MNELRRRWQIMSQRERMMTLACGGLVLLCLLYYLCWAPWQERARQWQMTIDRERQTVRWM 60

Query: 61  KQTANKIAGLKQSGAKPTMSG---SLSSVVNQTAGSYGLVITRMQPQGDKIQVWMDDVPF 117
           +Q A ++   +  GA+  ++G   SL+ +V Q+A  YG+ + RMQPQ  ++ V +    F
Sbjct: 61  QQQAPRLPPAE--GARRQIAGRDISLTVLVPQSAARYGITVLRMQPQESQVSVTLARSDF 118

Query: 118 DALLNYLSDLVQKKGLSLESVDL-AEADAPGYVKVRRIQL 156
           + LL++L++L QK G+  + +D+ A  ++ G V+V R+ L
Sbjct: 119 NNLLHWLAELEQKNGVITQGLDVTAVPNSAGMVEVTRLSL 158