Pairwise Alignments

Query, 395 a.a., general secretion pathway protein L (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 411 a.a., Type II secretory pathway, component PulL from Kangiella aquimarina DSM 16071

 Score =  102 bits (254), Expect = 2e-26
 Identities = 92/401 (22%), Positives = 177/401 (44%), Gaps = 21/401 (5%)

Query: 1   MSERLFIRLGRTAEQACSWLVWSEQEQ--EIIASGELANAQGLSTLTERAGNRPIDVLVP 58
           M +RLFIRL ++ E++  W + + +E   +    GEL     +  L E+A    + +L+P
Sbjct: 1   MKDRLFIRL-KSDEESLEWGLMTHEESVPKFSEQGELL-LDDMIALAEQAAQNEVVLLLP 58

Query: 59  ASAMTLTSVNLPEKGQRQALKALPFMLEESIADDVDAMHFTVGPRNGDALSVVAVAHEQ- 117
           AS +   +V  P + ++Q  KA+P++LEE + ++V+   F +G  N   +  V V  +  
Sbjct: 59  ASRVRCFNVKAPTRNRKQLEKAVPYILEEQVLENVEQQLFALGSINASGMVAVNVVDKSY 118

Query: 118 MQTWLSCLADAGLKVKRIVPDCLALPLQECQWAAMRFGNELLLRTGLGTGHSLPLPWLPV 177
           ++  L  L +A ++   +V D   LPL +  W+ +   + +L+R       S     L  
Sbjct: 119 LEDVLERLKNASIEPDYVVSDASCLPLFDDAWSVLEHDDSILVRQSANEYWSTEADMLSD 178

Query: 178 AMK-QLTAQAEELSVAS-----YSEMQ-------LDGVELKPQPLDLPMLVLARGILHAP 224
            M   L  Q EE    S     YS  +       + G+ ++  P++     L     ++ 
Sbjct: 179 LMSWNLQTQFEENQTVSQAVRIYSPDENTNLLAGIAGLAIQKMPVENSFEWLCSQFNYSL 238

Query: 225 INLLSGVYTPKREYSKHLLQWKNAAIVLAVAIVLSLVNKGLTIHQVNGQIADLKAQSEAI 284
           +NLL   ++ ++++  +L QWK  AI     I +  +     +  +N Q    + Q    
Sbjct: 239 LNLLQQEFSSQKKHQVNLGQWKMPAIAAIALIAVGFIYLISQMIVLNQQKNQYEQQILTS 298

Query: 285 YQQVVPGNTRIVNLRSQMESQLRSLQGQGSGAEFFSMLAGLQDAFKQVPELKPNSLRFES 344
            QQV P  + +     Q+ ++  +L G  + A  F +L     A      +K + L + S
Sbjct: 299 IQQVFPNVSDVNTGLIQVSNRFSTLGGDAASANSFMLLLDKSLAAIDPQTIKVSQLEYLS 358

Query: 345 ARNEIRMQVTAKNYAQI---EKFKEIVGRRFQMDGGTMNSG 382
           +  ++   V   +Y+ +   +   E  G + +M   + + G
Sbjct: 359 SMAQLSFDVETSDYSTLTAAQNKLEATGMQVEMRNASESGG 399