Pairwise Alignments

Query, 255 a.a., general secretion pathway protein J (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 234 a.a., general secretion pathway protein J from Kangiella aquimarina DSM 16071

 Score = 74.3 bits (181), Expect = 2e-18
 Identities = 61/250 (24%), Positives = 112/250 (44%), Gaps = 25/250 (10%)

Query: 4   KRTNAHRG-FTLLEMLIAIAIFAMLGLAANAVLSTVLTNDEVTKNFSTRLKALQQGFGAI 62
           KR +A +  FTL E+L+A+ +F+++   A  V + +    +       R++ +Q     +
Sbjct: 2   KRIHAKQAAFTLTEILVALFVFSVVVAGALQVFTFLQNATDSNDKQIQRIREVQMAVRQL 61

Query: 63  ERDLGQMVARTPRLLEGGRGTTVFQTGNDILDSESEALVFYRLGWLNPDGLLPRGSLQSV 122
           E D+  +V RT R   G     +    + +    +  L F R GW NP   L R  LQ +
Sbjct: 62  EEDIRYLVPRTRRDEYGDTSPLIVGESSSV----NSYLEFTRAGWRNP-AKLSRSELQHL 116

Query: 123 AYVVREGKLERWYFPYPEPEFGAEPIKTVIIDKVLSVEYSFFMEDKW------ERKVEAT 176
            Y   + +L R ++ Y +P    + +  V++  V   +  F  +D W      +R  + T
Sbjct: 117 KYEFVDDELLRHHWIYVDPAQNGQELTRVMLTGVTEFKVEFLEDDNWKEDWIIDRGTKGT 176

Query: 177 KLPKAIAMEIEIEGLGKIQRKFMLPLGAAAPEKSKEEGNKDENTEDNKEDNGDSDNNGDG 236
            +P+A+ + IE++  G+I R F  P+   A  +  E            ++NG    +G G
Sbjct: 177 -MPEAVKVTIELKDFGEIYRLF--PMADFASNERSE----------GADENGRGGESGPG 223

Query: 237 SGNGEEDPGK 246
           +  G +  G+
Sbjct: 224 NDGGTDIRGR 233