Pairwise Alignments

Query, 255 a.a., general secretion pathway protein J (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 181 a.a., prepilin-type N-terminal cleavage/methylation domain-containing protein from Dickeya dadantii 3937

 Score = 40.8 bits (94), Expect = 2e-08
 Identities = 46/192 (23%), Positives = 81/192 (42%), Gaps = 21/192 (10%)

Query: 10  RGFTLLEMLIAIAIFAMLGLAANAVLSTVLTNDEVTKNFSTRLKALQQGFGAIERDLGQM 69
           +GFTLLE+L++IA+ A+L ++A  +L  + +  +  +     +  L  G   + +DL  +
Sbjct: 6   KGFTLLEVLVSIAVAAVLLVSAIFILRGLNSGSQRLRLQQQHITMLLTGMQQMHQDLANL 65

Query: 70  VARTPRLLEGGRGTTVFQTGNDILDSESEALVFYRLGWLNPDGLLPRGSLQSVAYVVREG 129
           V   P    GG    +      +  S+  AL F     L P     R S+  +A+ ++ G
Sbjct: 66  V---PFKRAGG---NLLLFAEPLDGSQLRALTF---SSLQPS---YRTSIVRIAWRLQNG 113

Query: 130 KLERWYFPYPEPEFGAEPIKTVIIDKVLSVEYSFFMEDKWERKVEATKL-PKAIAMEIEI 188
            + R        +    P    I+  V      F+ +  W+       L P AI + + +
Sbjct: 114 VIYR--------QTSLAPQWQAILTGVQGWSLRFYQQGSWQNATGWQPLPPSAIELTVTL 165

Query: 189 EGLGKIQRKFML 200
             LG  QR  +L
Sbjct: 166 SDLGTYQRLILL 177