Pairwise Alignments

Query, 255 a.a., general secretion pathway protein J (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 187 a.a., putative type II secretion protein GspJ from Escherichia coli BL21

 Score = 75.1 bits (183), Expect = 9e-19
 Identities = 55/183 (30%), Positives = 89/183 (48%), Gaps = 3/183 (1%)

Query: 19  IAIAIFAMLGLAANAVLSTVLTNDEVTKNFSTRLKALQQGFGAIERDLGQMVARTPRLLE 78
           +AIAIFA L L A  V + V   +        +L  +QQ    +  DL QM+ R  R  +
Sbjct: 1   MAIAIFASLALMAQQVTNGVTRVNSAVAGHDQKLNLMQQTMSFLTHDLTQMMPRPVRDDQ 60

Query: 79  GGRGTTVFQTGNDILDSESEALVFYRLGWLNPDGLLPRGSLQSVAYVVREGKLERWYFPY 138
           G R   +   G  +L SESE + F R G +NP   LPR +L +V Y + +G LER  +P 
Sbjct: 61  GQREPALL-AGAGVLASESEGMRFVRGGVVNPLMRLPRSNLLTVGYRIHDGYLERLAWPL 119

Query: 139 PEPEFGAEPIKTVIIDKVLSVEYSFFMEDKWERKVEATK-LPKAIAMEIEIEGLGKIQRK 197
            +     +P    +I    S+   F+   +W+    + + +P A+ + +     G+I+R 
Sbjct: 120 TDAAGSVKPTMQKLI-PADSLRLQFYDGTRWQESWSSVQAIPVAVRITLHSPQWGEIERI 178

Query: 198 FML 200
           ++L
Sbjct: 179 WLL 181