Pairwise Alignments

Query, 286 a.a., chaperonin HslO (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 325 a.a., 33 kDa chaperonin (Heat shock protein 33) (HSP33) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  202 bits (513), Expect = 1e-56
 Identities = 124/308 (40%), Positives = 179/308 (58%), Gaps = 37/308 (12%)

Query: 6   LHRYLFDNADVRGELVQLQNSYQQVIGSH----AYPPVLQTLLGELLAATSLLTATLKFS 61
           LH+++F+   VRG LV+L +++Q+++  H     YP  +  LLGE+ AA +L+ A +KF+
Sbjct: 4   LHKFVFEGLPVRGMLVRLTDAWQEILQRHRDAGGYPAAVTELLGEMTAAATLMQANIKFN 63

Query: 62  GDISVQLQGNGPVSLAVINGNNLQQLRGIARWDGELADDASLADLFG---QGYMVITLTP 118
           G + +Q+ G+GPV LAV        LR  A   GE+A DA L+ +     QG   ITL P
Sbjct: 64  GALIMQIMGDGPVKLAVAEVQPDLSLRATATVVGEVAADAPLSHMVNATNQGRCAITLDP 123

Query: 119 DEG----ERYQGVVAL--DK----PTLAACVEDYFNQSEQLPTALWLFADGKQAAGMFLQ 168
            +     + YQGVV L  DK      L+  +E Y  QSEQL T L L AD K AAG+ +Q
Sbjct: 124 KDRLPGQQPYQGVVPLFGDKREKLEKLSEVIEHYMLQSEQLDTRLVLAADDKMAAGLLIQ 183

Query: 169 ILPSQ-------------EDH---NADFEHLCQLTATIKAEELFTLEAQEVLHRLYHQEE 212
            LP Q             ED    N D+  +  L A++K EEL  L+A  +LHRL+ +E+
Sbjct: 184 RLPLQGVDNLAGQSGARDEDQIGVNEDYNRIAILAASLKREELLGLDADTILHRLFWEED 243

Query: 213 VRLFDPIEVS----FKCTCSRERSAAAIKTIDQAEVEAILAEDGNVEMGCEYCNAKYLFD 268
           +R F+P+       F CTCSRER  + ++++ + EVE+ILAE G VE+GCE+C A+Y FD
Sbjct: 244 LRRFEPLTGEQGPRFACTCSRERVGSMLRSLGRDEVESILAEQGQVEVGCEFCGAQYRFD 303

Query: 269 AIDIASIY 276
            +D A ++
Sbjct: 304 PVDAAQVF 311