Pairwise Alignments

Query, 519 a.a., transporter, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 543 a.a., AbgT family transporter from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  366 bits (940), Expect = e-105
 Identities = 205/502 (40%), Positives = 300/502 (59%), Gaps = 9/502 (1%)

Query: 12  RFLNTVETLGNKLPDPAVLFAIFLGLVWLISWWLSGVSFAEIDPRTGNPIKVVNMLEGGA 71
           R LN VE +GN+LPDP  LF   +G + ++S   +G+ ++ ++P TG+ +   ++L    
Sbjct: 6   RALNAVERIGNRLPDPVFLFLWLIGGLLVLSMVGAGLGWSAVNPVTGDQLVAKSLLSAEN 65

Query: 72  LTAFTSTLVSTFVTFPPLGVVLVAMLGLGVAEHTGFINAGLRSILSVTPKMLLTPVLIAV 131
           L      +  T   FPPLG+V+  + G  VAE TG     +R  L   P+ +LTPV++  
Sbjct: 66  LEQLIIGMPRTLADFPPLGIVITIIYGASVAERTGMFATAIRGALLNAPRSILTPVVVIT 125

Query: 132 GILSHVAVDAGYVLVIPLGAVIFYAAGRHPLAGIAAAFAGVSGGFSATVGVPSSLDPMLA 191
           G++SH A DA YV+VIPL AVIF AAGRHPLAG+AA FA VSGG++  +  P + D ++ 
Sbjct: 126 GMVSHHASDASYVVVIPLAAVIFAAAGRHPLAGLAAGFAAVSGGYAGNL-FPGASDALIL 184

Query: 192 GLTQAAARLSADPAAATLTINPLNNIFFTSASAILIILVGWFITDKVIEPRLKKTAVNGD 251
           G+T+ AARL  DP+    ++N   N FF      +   + WF+TD+VIEPRL     +  
Sbjct: 185 GITEPAARL-IDPS---YSVNIAGNWFFIVGVVFVFTPIVWFLTDRVIEPRLGVWKPSEG 240

Query: 252 PATLPTLDELQP---NERRGLRFAMLSMLLCVLGLVLTAYGDNSAWRGEDGGLTSASAPL 308
            A  P   E QP    E+RGL+FA L++L  +    L  +   S +   +        PL
Sbjct: 241 VAA-PNASEKQPLTAAEKRGLKFAGLALLGMIALWALLTFIPGSPFVDSEVDPEQKFNPL 299

Query: 309 MRSIVAIIFVFFLIPGIVYGYVAGTANNHRAIIQGMSKSMSGMGYYIVMAFFCAQFIYAF 368
            +S+VA   + F + G  YG  AGT  +HR ++  M   ++ +  YIV+AFF A F+  F
Sbjct: 300 YKSLVAFFAITFFVTGGAYGAGAGTIQSHRDMVTMMRDGIAQLAPYIVLAFFAAHFVAMF 359

Query: 369 GQSNLGALMAIKGALALKELALPLSVTLVGIIFLTALVNLLVGSASAKWALIGAIMVPML 428
             S LG ++A+  A  LK LALP  + L+ ++F++   +L +GSASAKW+ +  I+VPM 
Sbjct: 360 NWSGLGPILAVNAAAGLKTLALPAPLLLICVVFVSCFFDLFIGSASAKWSALAPIVVPMF 419

Query: 429 MELGVSPDLTQAAYRVGDSSTNIITPLMPYFPLIVVFCQKYVKESGIGTLIALMLPFSIS 488
           M LG+SP++T AAYR+GDS TNI TPLM YFPLI+ F Q++    G+G+L+A MLP++ +
Sbjct: 420 MLLGISPEMTTAAYRMGDSVTNIATPLMSYFPLILTFAQRWDPRFGLGSLMATMLPYAGA 479

Query: 489 FLLLWSAFLLVYWALGLPLGIG 510
           FL+   A +  + A  LPLG G
Sbjct: 480 FLVAGLAMVAAWVAFDLPLGPG 501