Pairwise Alignments

Query, 308 a.a., putative SAM-dependent methyltransferase (RefSeq) from Shewanella oneidensis MR-1

Subject, 317 a.a., Ribosomal RNA large subunit methyltransferase F from Pseudomonas putida KT2440

 Score =  276 bits (707), Expect = 3e-79
 Identities = 150/303 (49%), Positives = 189/303 (62%), Gaps = 6/303 (1%)

Query: 2   HLHGYDFVALMASFPKLKAFVRPTAYGALSIDFADPLAVKNLNAALLKQHYQIDFWDIPK 61
           H   YDF +L+ + P L  F     +G  SIDFA+P AV+  N ALLK  Y I  WDIP 
Sbjct: 14  HQGRYDFPSLIKAHPDLARFTITNPHGKPSIDFANPEAVRVFNRALLKAQYGIQHWDIPA 73

Query: 62  GALCPPIPGRVDYVHYLADLLFE--GATAPRVEQVCALDIGTGANGIYAILGQQVYGWQF 119
             LCPPIPGR DY+H  ADLL +      PR  QV ALDIG GAN IY +LG   Y W+F
Sbjct: 74  DYLCPPIPGRADYIHVAADLLADDNAGDVPRGAQVRALDIGVGANCIYPLLGYSDYRWRF 133

Query: 120 VASDINPQSLANVQRIIDNNSCLQGHVTLRRQRDENAIFKGIIEAADRFELTLCNPPFHA 179
           + SDI+P +LA+ + I+  N  L   +TLR+Q +   I  G+++  +RF+LTLCNPPFHA
Sbjct: 134 LGSDIDPVALASAKAIVQANG-LGKAITLRQQANRAHILSGLLQEGERFDLTLCNPPFHA 192

Query: 180 SLREASEGSQRKVRNLQLSRGEKPKATGASLNFGGQAAELWCQGGEKQFLATMIRESHMF 239
           S  EA+ GSQRK +NL     + PK     LNFGGQ  ELWC+GGE +F+  +I ES  +
Sbjct: 193 SRDEATRGSQRKWKNLGK---QDPKRKLPVLNFGGQNNELWCEGGEIRFVTQLIGESVQY 249

Query: 240 AEQCLWFTSLVSKQENLKPCYQALAKLGVDTVKTIEMQQGNKVTRVLAWSFHSQAKRLRW 299
           AE+ LWFTSLVSK  NL     AL K G   V+ IEM QG K +R++AWSF   A R  W
Sbjct: 250 AERVLWFTSLVSKASNLPGIEAALKKSGAKAVRIIEMGQGQKQSRMVAWSFLDDAARQAW 309

Query: 300 RSE 302
            ++
Sbjct: 310 HAQ 312