Pairwise Alignments

Query, 235 a.a., histidine utilization repressor (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 273 a.a., HTH-type transcriptional repressor NagR from Xanthobacter sp. DMC5

 Score = 84.3 bits (207), Expect = 2e-21
 Identities = 65/202 (32%), Positives = 98/202 (48%), Gaps = 12/202 (5%)

Query: 4   PKFAEIKQYITGCIESGEWEE-NARVPSENQLAELFVCSRMTARRALTELTDNGVLERSQ 62
           P +A+IKQ + G I   +W++ + R  S+ QL  +F  SR TAR+A+ EL   G+L RS+
Sbjct: 27  PLYAQIKQRLIGLIL--KWDQGDRRFFSDEQLCAMFSVSRDTARQAVAELVQEGLLTRSR 84

Query: 63  GLGTFVAGRKSQSSMLAIRNIADEIKDRGHGYSVQQLALEQVNATAPIAIALALDVGSPV 122
           GLGTFV+ RK +       +  ++    G       LA E++ A   IA  L  ++G+ V
Sbjct: 85  GLGTFVSVRKLEERFNPGMDFLNQWAATGMPMQATVLAFERIAADETIAAGLETEIGAKV 144

Query: 123 FHSILVHCEQGVPLQVEERYVNPAFAPDYLVQDFSEQTPH----EYLSQVAPLTEAHHTI 178
                +     VPL ++ RY+     P  L  D++E+  H      L Q   L     TI
Sbjct: 145 LFIKRLRAAARVPLAIDYRYL-----PADLTADWTEEAVHGSPLHRLWQAVDLKTGDFTI 199

Query: 179 EAIIASSELQQRLAIPATEPCL 200
           EA +A  E  + L +    P L
Sbjct: 200 EAGVAGPEEVEYLHLSKGAPVL 221